RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 CD82P27701 267 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 S100GP29377 79 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 PCSK4Q6UW60 755 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 RAB40CQ96S21 281 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 SLC25A22Q9H936 323 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 PPIAL4AQ9Y536 164 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 RBM7Q9Y580 266 aaKnown RBP16.32■□□□□ 0.2
ZNF554-201ENST00000317243 SYNGR2O43760 224 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 SS18L1O75177 396 aaPredicted RBP16.32■□□□□ 0.2
ZNF554-201ENST00000317243 IL6RP08887 468 aaPredicted RBP16.32■□□□□ 0.2
ZNF554-201ENST00000317243 TECTBQ96PL2 329 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 PSMG3Q9BT73 122 aaPredicted RBP16.32■□□□□ 0.2
ZNF554-201ENST00000317243 DNAJC4Q9NNZ3 241 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 MANBALQ9NQG1 85 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 OR1A1Q9P1Q5 309 aa16.32■□□□□ 0.2
ZNF554-201ENST00000317243 KIAA1324LA8MWY0 1029 aaPredicted RBP16.31■□□□□ 0.2
ZNF554-201ENST00000317243 PSMB3P49720 205 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 LRRC75BQ2VPJ9 315 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 Q6ZS49 121 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 WDR86Q86TI4 376 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 MKXQ8IYA7 352 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 ANAPC16Q96DE5 110 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 OR4C12Q96R67 309 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 CD46P15529 392 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 SOX8P57073 446 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 RPL15P61313 204 aaKnown RBP16.31■□□□□ 0.2
ZNF554-201ENST00000317243 SERF2P84101 59 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 PLP2Q04941 152 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 NRN1LQ496H8 165 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 OR8G2PQ6IF36 304 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 FAM53AQ6NSI3 398 aaPredicted RBP16.31■□□□□ 0.2
ZNF554-201ENST00000317243 Q6ZWC4 215 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 FDCSPQ8NFU4 85 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 FER1L6-AS2Q96M78 137 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 TMEM106BQ9NUM4 274 aa16.31■□□□□ 0.2
ZNF554-201ENST00000317243 UBE2L5PA0A1B0GUS4 154 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 TNFSF13O75888 250 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 TCF23Q7RTU1 214 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 C11orf42Q8N5U0 333 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 OR5P3Q8WZ94 311 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 TRAV24A0A0B4J272 114 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 IGKV1-39P01597 117 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 IGKV1D-39P04432 117 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 CTXN2P0C2S0 81 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 SRP14P37108 136 aaKnown RBP16.3■□□□□ 0.2
ZNF554-201ENST00000317243 KCNIP4Q6PIL6 250 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 BCL2L2Q92843 193 aaPredicted RBP16.3■□□□□ 0.2
ZNF554-201ENST00000317243 C20orf144Q9BQM9 153 aa16.3■□□□□ 0.2
ZNF554-201ENST00000317243 HEATR1Q9H583 2144 aaKnown RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 ANKRD11Q6UB99 2663 aaPredicted RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 C1QTNF9BB2RNN3 333 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 TMEM250H0YL14 139 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 AGFG2O95081 481 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 CDKN1AP38936 164 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 FBXW9Q5XUX1 488 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 CXorf67Q86X51 503 aaPredicted RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 KCNS2Q9ULS6 477 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 RNPS1Q15287 305 aaKnown RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 TPTE2P1Q5T6R2 138 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 ZNF324BQ6AW86 544 aaPredicted RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 CMTM2Q8TAZ6 248 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 VN1R17PQ8TDU5 208 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 WDR61Q9GZS3 305 aaKnown RBP16.29■□□□□ 0.2
ZNF554-201ENST00000317243 FZR1Q9UM11 496 aa16.29■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A10PA6NDY2 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A18PA6NE21 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A16PA6NEW6 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A20PA6NIJ5 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A8PA6NJQ4 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A7PA6NKC0 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A22PA8MWA6 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A12PA8MX19 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A5PA8MXJ8 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A23PA8MXZ1 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 YPEL1O60688 119 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A15PP0C7V4 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A13PP0C7W8 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A14PP0C7W9 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 FAM90A24PP0C7X0 464 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 EGR1P18146 543 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 OR10V1Q8NGI7 309 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 LOXL4Q96JB6 756 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 YPEL2Q96QA6 119 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 WDR1O75083 606 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 ARR3P36575 388 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 RAB7AP51149 207 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 HBG1P69891 147 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 HBG2P69892 147 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 Q8NFD4 153 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 PINX1Q96BK5 328 aaKnown RBP16.28■□□□□ 0.2
ZNF554-201ENST00000317243 PXMP4Q9Y6I8 212 aa16.28■□□□□ 0.2
ZNF554-201ENST00000317243 IGKV1-5P01602 117 aa16.27■□□□□ 0.2
ZNF554-201ENST00000317243 RPS16P62249 146 aaKnown RBP16.27■□□□□ 0.2
ZNF554-201ENST00000317243 RPP30P78346 268 aaKnown RBP16.27■□□□□ 0.2
ZNF554-201ENST00000317243 MRPL52Q86TS9 123 aaKnown RBP16.27■□□□□ 0.2
ZNF554-201ENST00000317243 PATZ1Q9HBE1 687 aaKnown RBP16.27■□□□□ 0.2
ZNF554-201ENST00000317243 SIRPB1O00241 398 aa16.27■□□□□ 0.19
ZNF554-201ENST00000317243 BMP5P22003 454 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms