RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 TIPARPQ7Z3E1 657 aaKnown RBP11.26□□□□□ -0.61
SKA3-202ENST00000314759 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
SKA3-202ENST00000314759 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
SKA3-202ENST00000314759 PSPNO60542 156 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 YPEL1O60688 119 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 NXPH2O95156 264 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 BRS3P32247 399 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 PCP4P48539 62 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 LCN2P80188 198 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 MRPS11P82912 194 aaKnown RBP11.25□□□□□ -0.61
SKA3-202ENST00000314759 ZXDAP98168 799 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 CT55Q8WUE5 264 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 YPEL2Q96QA6 119 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 SH2D1BO14796 132 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 TFPI2P48307 235 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 GNB1P62873 340 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 MDP1Q86V88 176 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 Q8IYB0 196 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 TDHQ8IZJ6 230 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 Q8N7P7 452 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 ADMP35318 185 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 CDKN1AP38936 164 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
SKA3-202ENST00000314759 LINC00205P59089 165 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 ZBTB34Q8NCN2 500 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 HLA-CQ95604 372 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 GALMQ96C23 342 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 POLDIP2Q9Y2S7 368 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
SKA3-202ENST00000314759 ATP5G3P48201 142 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 TNFSF10P50591 281 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 GAGE1Q13065 139 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 ALKBH6Q3KRA9 238 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 KCNIP1Q9NZI2 227 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 B4GALT7Q9UBV7 327 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 M0QZK8 103 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 NDUFB4O95168 129 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 RAC2P15153 192 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 LINC00310P59036 64 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 UBE2G2P60604 165 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 DCAF12Q5T6F0 453 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 TTTY12Q9BZ98 90 aa11.24□□□□□ -0.61
SKA3-202ENST00000314759 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 TMPRSS2O15393 492 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 RBMXL2O75526 392 aaKnown RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 DUSP3P51452 185 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 SOX8P57073 446 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 PPP1CBP62140 327 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 TMPRSS7Q7RTY8 843 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 CMTM2Q8TAZ6 248 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 OPN3Q9H1Y3 402 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 C17orf112F2Z3M2 114 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.61
SKA3-202ENST00000314759 CLDN14O95500 239 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 HAND1O96004 215 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 CD99P14209 185 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 C6orf15Q6UXA7 325 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 MAFAQ8NHW3 353 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
SKA3-202ENST00000314759 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
SKA3-202ENST00000314759 RAB29O14966 203 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 PDE6DO43924 150 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 TNFSF13O75888 250 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 GRPP07492 148 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 CELA3BP08861 270 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 AESQ08117 197 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 CATR1Q13166 79 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 TMEM251Q8N6I4 163 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 ELOVL5Q9NYP7 299 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 F2Z2F3 143 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 HBZP02008 142 aa11.22□□□□□ -0.61
SKA3-202ENST00000314759 HNF1AP20823 631 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms