RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 Q96M66 194 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 A0A1W2PS18 150 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 A8MXK9 166 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 OR11H12B2RN74 326 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 TSPAN2O60636 221 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 CCL8P80075 99 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 MBNL2Q5VZF2 373 aaKnown RBP11.76□□□□□ -0.53
CLCN6-201ENST00000312413 LAIR2Q6ISS4 152 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 OR11H1Q8NG94 326 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 EAF1Q96JC9 268 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-201ENST00000312413 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-201ENST00000312413 HBBP68871 147 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 CX3CL1P78423 397 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 PSG9Q00887 426 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 TAF1P21675 1872 aa11.76□□□□□ -0.53
CLCN6-201ENST00000312413 GDF9O60383 454 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 RTN4RQ9BZR6 473 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 SLC25A17O43808 307 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 NIT1Q86X76 327 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 MRPL32Q9BYC8 188 aaKnown RBP11.75□□□□□ -0.53
CLCN6-201ENST00000312413 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-201ENST00000312413 B4E171 279 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 UBE2L6O14933 153 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 GCHFRP30047 84 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 CENPWQ5EE01 88 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 NABP2Q9BQ15 211 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-201ENST00000312413 KLK15Q9H2R5 256 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 LHFPL6Q9Y693 200 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 DLX6P56179 175 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 TTTY12Q9BZ98 90 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 CGB1A6NKQ9 187 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 ZIC3O60481 467 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
CLCN6-201ENST00000312413 SDHCQ99643 169 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-201ENST00000312413 IGKV1-8A0A0C4DH67 115 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 ODAMA1E959 279 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 S1PR2O95136 353 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 SAXO1Q8IYX7 474 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 MRPS16Q9Y3D3 137 aaKnown RBP11.74□□□□□ -0.53
CLCN6-201ENST00000312413 LOC105371267A0A1B0GV96 52 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 ZP1P60852 638 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 C14orf144Q96I85 54 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 EGR1P18146 543 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 SLC25A53Q5H9E4 307 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 APOBEC4Q8WW27 367 aaKnown RBP11.74□□□□□ -0.53
CLCN6-201ENST00000312413 ZCCHC14Q8WYQ9 949 aaKnown RBP11.74□□□□□ -0.53
CLCN6-201ENST00000312413 RCC1LQ96I51 464 aaKnown RBP11.74□□□□□ -0.53
CLCN6-201ENST00000312413 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-201ENST00000312413 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 G6PC2Q9NQR9 355 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 CALYQ9NYX4 217 aa11.74□□□□□ -0.53
CLCN6-201ENST00000312413 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 C1QTNF9BB2RNN3 333 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 MFAP4P55083 255 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 FAM169BQ8N8A8 192 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 FSCN3Q9NQT6 498 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 HILPDAQ9Y5L2 63 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 TRPM6Q9BX84 2022 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 TFPI2P48307 235 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-201ENST00000312413 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 C10orf126Q8N4M7 172 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 TTC9CQ8N5M4 171 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 C1orf210Q8IVY1 113 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 ZDHHC8Q9ULC8 765 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
CLCN6-201ENST00000312413 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-201ENST00000312413 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 GPR82Q96P67 336 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 SCN3AQ9NY46 2000 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 ERGP11308 486 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 PRSS53Q2L4Q9 553 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
CLCN6-201ENST00000312413 PAPPA2Q9BXP8 1791 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 A0A1B0GWB2 263 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms