RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 PARP11Q9NR21 331 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 INSIG2Q9Y5U4 225 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 A0A1W2PPV4 95 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 PDLIM4P50479 330 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 ATP5IP56385 69 aaPredicted RBP12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 PJVKQ0ZLH3 352 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 NARFLQ9H6Q4 476 aa12.93□□□□□ -0.34
CGGBP1-201ENST00000309534 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 MED19A0JLT2 244 aaPredicted RBP12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 AGPAT2O15120 278 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 KCNAB3O43448 404 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 ETV3LQ6ZN32 361 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 SLC35E1Q96K37 410 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 ZNF251Q9BRH9 671 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 FAM71F2Q6NXP2 309 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 ABHD5Q8WTS1 349 aa12.92□□□□□ -0.34
CGGBP1-201ENST00000309534 COX6B1P14854 86 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 FGF7P21781 194 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 IL15RAQ13261 267 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 SVBPQ8N300 66 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 OR4C13Q8NGP0 309 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 PARP12Q9H0J9 701 aaKnown RBP12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 COL6A6A6NMZ7 2263 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 TMEM200BQ69YZ2 307 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 CYYR1Q96J86 154 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 DIDO1Q9BTC0 2240 aaKnown RBP12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 POLEQ07864 2286 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 HSPE1P61604 102 aaKnown RBP12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 CR1LQ2VPA4 569 aa12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 SSBP3Q9BWW4 388 aaPredicted RBP12.91□□□□□ -0.34
CGGBP1-201ENST00000309534 ZP3P21754 424 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 LGALS7P47929 136 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 HES1Q14469 280 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 CCL3L1P16619 93 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 TMEM133Q9H2Q1 129 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 OR51B2Q9Y5P1 312 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 USF1P22415 310 aaPredicted RBP12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 TAGLN2P37802 199 aaKnown RBP12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 EFNA4P52798 201 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 SLC25A48Q6ZT89 311 aaKnown RBP12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
CGGBP1-201ENST00000309534 IGSF23A1L1A6 192 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 SNAPINO95295 136 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 CEBPGP53567 150 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 TOR2AQ5JU69 321 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 C22orf34Q6ZV56 151 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 STPG2Q8N412 459 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 NANPQ8TBE9 248 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.35
CGGBP1-201ENST00000309534 J3QR06 171 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 ATP6V0CP27449 155 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 SERF2P84101 59 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 IFI27L2Q9H2X8 130 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 CT45A3Q8NHU0 189 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 PIMREGQ9BSJ6 248 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 HSPB7Q9UBY9 170 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 A0A1B0GV50 99 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 IGKV1-5P01602 117 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 PPT1P50897 306 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 HNF4GQ14541 408 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 ZNF273Q14593 569 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 KPTNQ9Y664 436 aa12.89□□□□□ -0.35
CGGBP1-201ENST00000309534 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 Q6ZPA2 131 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 RAMP3O60896 148 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 FOXH1O75593 365 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 CNIH1O95406 144 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 NPY1RP25929 384 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 KBTBD11O94819 623 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 CCL19Q99731 98 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 TCF19Q9Y242 345 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms