RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 KRTCAP3Q53RY4 240 aa11.45□□□□□ -0.58
AFF1-201ENST00000307808 SAPCD1Q5SSQ6 148 aa11.45□□□□□ -0.58
AFF1-201ENST00000307808 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
AFF1-201ENST00000307808 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
AFF1-201ENST00000307808 GLIPR1P48060 266 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 RBM11P57052 281 aaKnown RBP11.44□□□□□ -0.58
AFF1-201ENST00000307808 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 TMEM30AQ9NV96 361 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 EML2O95834 649 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 PIGYQ3MUY2 71 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 OR51G1Q8NGK1 321 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 MARS2Q96GW9 593 aaKnown RBP11.44□□□□□ -0.58
AFF1-201ENST00000307808 TREM2Q9NZC2 230 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 CA7P43166 264 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 RHBDD2Q6NTF9 364 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 MMD2Q8IY49 270 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 ASB1Q9Y576 335 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 ALPK3Q96L96 1907 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 SIGLEC5O15389 551 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 TSPAN2O60636 221 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 STARD6P59095 220 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 RAE1P78406 368 aaKnown RBP11.44□□□□□ -0.58
AFF1-201ENST00000307808 PSG6Q00889 435 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
AFF1-201ENST00000307808 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
AFF1-201ENST00000307808 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
AFF1-201ENST00000307808 VENTXO95231 258 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 RPS11P62280 158 aaKnown RBP eCLIP11.43□□□□□ -0.58
AFF1-201ENST00000307808 CLDN16Q9Y5I7 305 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 NPIPB8E9PQR5 432 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 NPIPB9F8W1W9 429 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 NPIPB7O75200 414 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 INSL4Q14641 139 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 CCL4L1Q8NHW4 92 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 HMGCLL1Q8TB92 370 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 SRIP30626 198 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 FOXJ2Q9P0K8 574 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 SF3B6Q9Y3B4 125 aaKnown RBP11.43□□□□□ -0.58
AFF1-201ENST00000307808 GPX4P36969 197 aaPredicted RBP11.43□□□□□ -0.58
AFF1-201ENST00000307808 GCSAMQ8N6F7 178 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 KIR3DL3Q8N743 410 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 APELAP0DMC3 54 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 CCL2P13500 99 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 MFAP4P55083 255 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
AFF1-201ENST00000307808 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
AFF1-201ENST00000307808 WDR54Q9H977 334 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 G6PC2Q9NQR9 355 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 ADAMTS9Q9P2N4 1935 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 NKX2-8O15522 239 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 PNLIPP16233 465 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 GGACTQ9BVM4 153 aa11.43□□□□□ -0.58
AFF1-201ENST00000307808 TRAV9-1A0A075B6T8 112 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
AFF1-201ENST00000307808 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
AFF1-201ENST00000307808 PARLQ9H300 379 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 COL24A1Q17RW2 1714 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 CD1AP06126 327 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 PDCD1Q15116 288 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 ANAPC13Q9BS18 74 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 CCL28Q9NRJ3 127 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 SOCS1O15524 211 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
AFF1-201ENST00000307808 PRDM14Q9GZV8 571 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 FBXW9Q5XUX1 488 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 SPINK14Q6IE38 97 aa11.42□□□□□ -0.58
AFF1-201ENST00000307808 P2RY6Q15077 328 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 C1QTNF12Q5T7M4 302 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FMC1Q96HJ9 113 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A10PA6NDY2 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A18PA6NE21 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A16PA6NEW6 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A20PA6NIJ5 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A8PA6NJQ4 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A7PA6NKC0 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A22PA8MWA6 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A12PA8MX19 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A5PA8MXJ8 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A23PA8MXZ1 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A15PP0C7V4 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A13PP0C7W8 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A14PP0C7W9 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 FAM90A24PP0C7X0 464 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 PUSL1Q8N0Z8 303 aaKnown RBP11.41□□□□□ -0.58
AFF1-201ENST00000307808 OR2Y1Q8NGV0 311 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 CLDND2Q8NHS1 167 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 TNFRSF19Q9NS68 423 aa11.41□□□□□ -0.58
AFF1-201ENST00000307808 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms