RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 UCP2P55851 309 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 ZNF324O75467 553 aaPredicted RBP14.88□□□□□ -0.03
SYNPO-201ENST00000307662 GCHFRP30047 84 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 ARF6P62330 175 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 IZUMO4Q1ZYL8 232 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 SMRP1Q8NCR6 262 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 ZNF714Q96N38 554 aa14.88□□□□□ -0.03
SYNPO-201ENST00000307662 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 RGPD4Q7Z3J3 1758 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 IGHV4-34P06331 123 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 GALNT14Q96FL9 552 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 TNFRSF19Q9NS68 423 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 POLR2AP24928 1970 aaKnown RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 TRIP12Q14669 1992 aaPredicted RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 ZNF658BQ4V348 819 aaPredicted RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 CENPWQ5EE01 88 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 TMEM78Q5T7P6 136 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 ASPHD2Q6ICH7 369 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 CTHRC1Q96CG8 243 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 ZNF501Q96CX3 271 aaPredicted RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 IGKV3-7A0A075B6H7 116 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 C21orf140B9A014 251 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 SMIM13P0DJ93 91 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 ADIPOQQ15848 244 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 SRSF12Q8WXF0 261 aaKnown RBP14.87□□□□□ -0.03
SYNPO-201ENST00000307662 ATAD5Q96QE3 1844 aa14.87□□□□□ -0.03
SYNPO-201ENST00000307662 THY1P04216 161 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 EGR1P18146 543 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 MC5RP33032 325 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 BIVMQ86UB2 503 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 BRWD1Q9NSI6 2320 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 SCN4AP35499 1836 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 A0A1B0GV72 72 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 A1L4Q6 167 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 NUDT3O95989 172 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 SMIM10L1P0DMW3 83 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 RND2P52198 227 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 SMIM10Q96HG1 83 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 MRPL32Q9BYC8 188 aaKnown RBP14.86□□□□□ -0.03
SYNPO-201ENST00000307662 TTTY12Q9BZ98 90 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 WNT10AQ9GZT5 417 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 TBL2Q9Y4P3 447 aaKnown RBP14.86□□□□□ -0.03
SYNPO-201ENST00000307662 SCN3AQ9NY46 2000 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 LIPFP07098 398 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 CRYBA2P53672 197 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 C2orf83Q53S99 150 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 IL36BQ9NZH7 164 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 IL9P15248 144 aa14.86□□□□□ -0.03
SYNPO-201ENST00000307662 PPIAL4EA0A075B759 164 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 PPIAL4DF5H284 164 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 PPIAL4FP0DN26 164 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 HTN1P15515 57 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 HBBP68871 147 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 PPIAL4AQ9Y536 164 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 NABP2Q9BQ15 211 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 MS4A5Q9H3V2 200 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 RTP5Q14D33 572 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 STPG3Q8N7X2 389 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 NDUFAF3Q9BU61 184 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 DUSP15Q9H1R2 295 aaPredicted RBP14.85□□□□□ -0.03
SYNPO-201ENST00000307662 RP1L1Q8IWN7 2480 aaPredicted RBP14.85□□□□□ -0.03
SYNPO-201ENST00000307662 FOXL2P58012 376 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.85□□□□□ -0.03
SYNPO-201ENST00000307662 HCP5Q6MZN7 132 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 TCF24Q7RTU0 167 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 OR4A5Q8NH83 315 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 CLDND2Q8NHS1 167 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 C14orf144Q96I85 54 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 CCL13Q99616 98 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 RTBDNQ9BSG5 229 aaPredicted RBP14.85□□□□□ -0.03
SYNPO-201ENST00000307662 SSBP3Q9BWW4 388 aaPredicted RBP14.85□□□□□ -0.03
SYNPO-201ENST00000307662 FSCN3Q9NQT6 498 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 NRXN2Q9P2S2 1712 aa14.85□□□□□ -0.03
SYNPO-201ENST00000307662 C7orf71A4D174 169 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 ID1P41134 155 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 CA7P43166 264 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 ECSCRQ19T08 205 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 AMMECR1LQ6DCA0 310 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 SDF2L1Q9HCN8 221 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 TCF19Q9Y242 345 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 RAMP1O60894 148 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 NIT1Q86X76 327 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 ARL6IP6Q8N6S5 226 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 MIEN1Q9BRT3 115 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 PRDM14Q9GZV8 571 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 RABAC1Q9UI14 185 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 ZNF646O15015 1829 aaPredicted RBP14.84□□□□□ -0.03
SYNPO-201ENST00000307662 ZNFX1Q9P2E3 1918 aaKnown RBP14.84□□□□□ -0.03
SYNPO-201ENST00000307662 SCGB1A1P11684 91 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 FGF5P12034 268 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 EGR4Q05215 589 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 CCDC144NLQ6NUI1 221 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 SPRED2Q7Z698 418 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 OR51G1Q8NGK1 321 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 SMOC1Q9H4F8 434 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 A0A1B0GTI1 187 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 LOC101059948A0A1B0GTJ6 334 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 LOC390937A0A1W2PQ73 354 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 UBE2CO00762 179 aa14.84□□□□□ -0.03
SYNPO-201ENST00000307662 JOSD1Q15040 202 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms