RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 OR4A5Q8NH83 315 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 EDA2RQ9HAV5 297 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 EVI2AP22794 236 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 SS18L1O75177 396 aaPredicted RBP10.87□□□□□ -0.67
USP38-201ENST00000307017 GAB4Q2WGN9 574 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 SLC25A33Q9BSK2 321 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 SCO2A0A1W2PP80 73 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 PF4P02776 101 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 DXOO77932 396 aaKnown RBP10.86□□□□□ -0.67
USP38-201ENST00000307017 HLA-DQB1P01920 261 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 PPIFP30405 207 aaKnown RBP10.86□□□□□ -0.67
USP38-201ENST00000307017 ZNF273Q14593 569 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 WDR54Q9H977 334 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 IGLV3-16A0A075B6K0 115 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 A1L4Q6 167 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 JKAMPQ9P055 326 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 ASXL3Q9C0F0 2248 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 K7N7A8 449 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 TMEM252Q8N6L7 170 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 LHFPL5Q8TAF8 219 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 C1QAP02745 245 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 GPX1P07203 203 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 AGAP20933 346 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 GLIPR1P48060 266 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 TXNDC17Q9BRA2 123 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 HMGA2P52926 109 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 KCNMB1Q16558 191 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 EBLN2Q6P2I7 272 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 PLSCR2Q9NRY7 297 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 ATAD5Q96QE3 1844 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 LIFP15018 202 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 ZP1P60852 638 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 DEFB121Q5J5C9 76 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 WBP1LQ9NX94 342 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 MPC1Q9Y5U8 109 aa10.86□□□□□ -0.67
USP38-201ENST00000307017 PTPRFP10586 1907 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 NKX2-8O15522 239 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 STAG3L2P0CL84 134 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 GNG5P63218 68 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 SRXN1Q9BYN0 137 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 NPFFR1Q9GZQ6 430 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 A0A087WV48 116 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 A0A0J9YW62 118 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 C4orf51C9J302 202 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 SUMO2P61956 95 aaKnown RBP10.85□□□□□ -0.67
USP38-201ENST00000307017 C11orf44Q8N8P7 122 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 CGAP01215 116 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 RNASE4P34096 147 aaKnown RBP10.85□□□□□ -0.67
USP38-201ENST00000307017 SAPCD1Q5SSQ6 148 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 LINC00518Q8N0U6 118 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 COX14Q96I36 57 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 NPVFQ9HCQ7 196 aa10.85□□□□□ -0.67
USP38-201ENST00000307017 hCG_38984A0A1B0GV85 526 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 ID1P41134 155 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 LBHQ53QV2 105 aaPredicted RBP10.84□□□□□ -0.67
USP38-201ENST00000307017 LCNL1Q6ZST4 164 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 SLC22A18ASQ8N1D0 253 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 ZNRF1Q8ND25 227 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 PPIAL4EA0A075B759 164 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 PPIAL4DF5H284 164 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 PPIAL4FP0DN26 164 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 UCP2P55851 309 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 ACSF3Q4G176 576 aaPredicted RBP10.84□□□□□ -0.67
USP38-201ENST00000307017 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CHST5Q9GZS9 411 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 PPIAL4AQ9Y536 164 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
USP38-201ENST00000307017 RAMP1O60894 148 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CD300LDQ6UXZ3 194 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 TAF15Q92804 592 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP38-201ENST00000307017 CHRNA10Q9GZZ6 450 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 IGKV1-8A0A0C4DH67 115 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 RPL27AP46776 148 aaKnown RBP10.84□□□□□ -0.67
USP38-201ENST00000307017 LRRC3BQ96PB8 259 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CDX2Q99626 313 aaPredicted RBP10.84□□□□□ -0.67
USP38-201ENST00000307017 MEGF9Q9H1U4 602 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CACFD1Q9UGQ2 172 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CCL27Q9Y4X3 112 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 RREB1Q92766 1687 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 MOSPD3O75425 235 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 CDS2O95674 445 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
USP38-201ENST00000307017 SLC25A34Q6PIV7 304 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms