RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PRB3Q04118 309 aaPredicted RBP12.31□□□□□ -0.44
PTPN9-201ENST00000306726 MSMO1Q15800 293 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 M1APQ8TC57 530 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
PTPN9-201ENST00000306726 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 BOKQ9UMX3 212 aaPredicted RBP12.31□□□□□ -0.44
PTPN9-201ENST00000306726 FCN1O00602 326 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 SLC31A2O15432 143 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 UCP1P25874 307 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 PPP1CBP62140 327 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 ASCL3Q9NQ33 180 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 FOXJ2Q9P0K8 574 aa12.31□□□□□ -0.44
PTPN9-201ENST00000306726 GZMBP10144 247 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 SRD5A2P31213 254 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
PTPN9-201ENST00000306726 SLC10A1Q14973 349 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 OR1C1Q15619 314 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 GALMQ96C23 342 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 TXN2Q99757 166 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 FGF23Q9GZV9 251 aaPredicted RBP12.3□□□□□ -0.44
PTPN9-201ENST00000306726 MBP02144 154 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 NMSQ5H8A3 153 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 LIN7CQ9NUP9 197 aaKnown RBP12.3□□□□□ -0.44
PTPN9-201ENST00000306726 DKK4Q9UBT3 224 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 KLF7O75840 302 aaPredicted RBP12.3□□□□□ -0.44
PTPN9-201ENST00000306726 PLAUP00749 431 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 SELLP14151 372 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 MYOD1P15172 320 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
PTPN9-201ENST00000306726 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
PTPN9-201ENST00000306726 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 GCH1P30793 250 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
PTPN9-201ENST00000306726 CEACAM21Q3KPI0 293 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 FADS6Q8N9I5 356 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 NEIL1Q96FI4 390 aaPredicted RBP12.29□□□□□ -0.44
PTPN9-201ENST00000306726 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 H0Y980 276 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 FER1L6-AS2Q96M78 137 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
PTPN9-201ENST00000306726 PROK2Q9HC23 129 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 CLCF1Q9UBD9 225 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 ZNF716A6NP11 495 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 H3BTX0 84 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 SH2D1BO14796 132 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
PTPN9-201ENST00000306726 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 OR5A2Q8NGI9 324 aa12.29□□□□□ -0.44
PTPN9-201ENST00000306726 CTXN2P0C2S0 81 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 PAX6P26367 422 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 CD81P60033 236 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 HAPLN4Q86UW8 402 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 SLC25A40Q8TBP6 338 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 WNT10AQ9GZT5 417 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 ENY2Q9NPA8 101 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
PTPN9-201ENST00000306726 ODAMA1E959 279 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 FOSL1P15407 271 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 FAM19A2Q8N3H0 131 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 NAT8BQ9UHF3 227 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 CCL11P51671 97 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 CNN1P51911 297 aaKnown RBP12.28□□□□□ -0.44
PTPN9-201ENST00000306726 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
PTPN9-201ENST00000306726 SSBP3Q9BWW4 388 aaPredicted RBP12.28□□□□□ -0.44
PTPN9-201ENST00000306726 ELOA3CA0A087WX78 387 aaPredicted RBP12.27□□□□□ -0.44
PTPN9-201ENST00000306726 NUPR1O60356 82 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.44
PTPN9-201ENST00000306726 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 GPR12P47775 334 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 CAMPP49913 170 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 FOXC1Q12948 553 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 CATR1Q13166 79 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 ZNF124Q15973 351 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 TEX38Q6PEX7 206 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 TMEM183AQ8IXX5 376 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 TMEM56Q96MV1 263 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 MANBALQ9NQG1 85 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.44
PTPN9-201ENST00000306726 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 Q0VFX4 171 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 Q6ZVH6 145 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 DOLPP1Q86YN1 238 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF114Q8NC26 417 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms