RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ZNF775Q96BV0 537 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 IGHV1-69-2A0A0G2JMI3 117 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PRKNO60260 465 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 LRRC29Q8WV35 223 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 GPR82Q96P67 336 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 COX11Q9Y6N1 276 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 LTBP1Q14766 1721 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 IGKV3D-11A0A0A0MRZ8 115 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 IGKV3-11P04433 115 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 ATP6V0CP27449 155 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM95Q3KNT9 176 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TCF24Q7RTU0 167 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 SNX22Q96L94 193 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TSPAN32Q96QS1 320 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TLNRD1Q9H1K6 362 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 ANAPC10Q9UM13 185 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 AGRNO00468 2067 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 hADV38S2A0JD32 116 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 LIPT2A6NK58 231 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 J3KRW8 73 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PSCAO43653 123 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TNFSF13O75888 250 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 DLX6P56179 175 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 SNRPD3P62318 126 aaKnown RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PMVKQ15126 192 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 MORN3Q6PF18 240 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 HEPN1Q6WQI6 88 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 OLIG3Q7RTU3 272 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM37Q8WXS4 190 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 FGF13Q92913 245 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 ISG20L2Q9H9L3 353 aaKnown RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 FITM1A5D6W6 292 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 GYPBP06028 91 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TRGC1P0CF51 173 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 OR3A4PP47883 348 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM136Q6ZRR5 245 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM25Q86YD3 366 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 OR51E1Q8TCB6 317 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 GDF15Q99988 308 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 DOPEY1Q5JWR5 2465 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 SHISA9B4DS77 424 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PRRT4C9JH25 899 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMPRSS2O15393 492 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 KLK10O43240 276 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 ATP5LO75964 103 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 ETHE1O95571 254 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 F13BP05160 661 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 COX6B1P14854 86 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PTGDSP41222 190 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 NXPH1P58417 271 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM252Q8N6L7 170 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 C5orf30Q96GV9 206 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 RNF167Q9H6Y7 350 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 TRAV8-7A0A075B6U6 113 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 SMAD2Q15796 467 aaKnown RBP4.56□□□□□ -1.68
SCN1A-201ENST00000303395 C2orf68Q2NKX9 166 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 DEFB109BQ30KR1 87 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 MSL2Q9HCI7 577 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 PLSCR4Q9NRQ2 329 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 WNT16Q9UBV4 365 aa4.56□□□□□ -1.68
SCN1A-201ENST00000303395 A0A0A6YYC8 382 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 I3L1I5 382 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 PCP4P48539 62 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 EXOSC7Q15024 291 aaKnown RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 SSBP4Q9BWG4 385 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 QTRT1Q9BXR0 403 aaKnown RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 LTB4R2Q9NPC1 389 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 A0A1W2PQM1 296 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 PGPA6NDG6 321 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 PRR32B1ATL7 298 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 K7EMI3 77 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 UPK3AO75631 287 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 CSN3P07498 182 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 IGFBP3P17936 291 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 ZNF121P58317 390 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-201ENST00000303395 GBGT1Q8N5D6 347 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 Q96M66 194 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 LINC00470Q9BZP3 86 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 TMEM106BQ9NUM4 274 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 H7C1H1 209 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 FLRT3Q9NZU0 649 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 ROS1P08922 2347 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 A0A1W2PRE2 83 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 FAM90A27PA6NNH2 459 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 SPRY3O43610 288 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 FCMRO60667 390 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 NPIPB7O75200 414 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 VSIG10L2P0DP72 767 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 FGF12P61328 243 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 SLC25A53Q5H9E4 307 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 RFLNAQ6ZTI6 216 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 WFDC3Q8IUB2 231 aa4.55□□□□□ -1.68
SCN1A-201ENST00000303395 RGP1Q92546 391 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms