RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SSX9Q7RTT3 188 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 VKORC1L1Q8N0U8 176 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 UBTD1Q9HAC8 227 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 PPIHO43447 177 aaKnown RBP18.22■□□□□ 0.51
SMAD1-201ENST00000302085 SULT1A1P50225 295 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 ZNF833PQ6ZTB9 187 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 OR4S2Q8NH73 311 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 ZNF596Q8TC21 504 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 RAB1CQ92928 201 aa18.22■□□□□ 0.51
SMAD1-201ENST00000302085 RBMXL1Q96E39 390 aaKnown RBP18.22■□□□□ 0.51
SMAD1-201ENST00000302085 A6NNC1 897 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 MED6O75586 246 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 IGHV1-8P0DP01 117 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 NQO2P16083 231 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 C8orf31Q8N9H6 132 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 RAB39BQ96DA2 213 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 BBC3Q96PG8 261 aaPredicted RBP18.21■□□□□ 0.51
SMAD1-201ENST00000302085 MIOXQ9UGB7 285 aa18.21■□□□□ 0.51
SMAD1-201ENST00000302085 FAM90A9PA6NNJ1 464 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 J3QR06 171 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 CRYZL1O95825 349 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 PRB1P04280 392 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 SULT1A2P50226 295 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 HSD17B11Q8NBQ5 300 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 OR1S2Q8NGQ3 325 aa18.21■□□□□ 0.5
SMAD1-201ENST00000302085 QTRT1Q9BXR0 403 aaKnown RBP18.21■□□□□ 0.5
SMAD1-201ENST00000302085 A0A087X0M5 115 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 A0A1B0GX30 115 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 ZNF705EA8MWA4 302 aaPredicted RBP18.2■□□□□ 0.5
SMAD1-201ENST00000302085 SEC11BP0C7V7 166 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 SPP1P10451 314 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 CDKN1AP38936 164 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 HAPLN4Q86UW8 402 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 STX12Q86Y82 276 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 LINC00311Q8N616 119 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 OR8B3Q8NGG8 313 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 NEIL1Q96FI4 390 aaPredicted RBP18.2■□□□□ 0.5
SMAD1-201ENST00000302085 TIMD4Q96H15 378 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 OR8B2Q96RD0 313 aa18.2■□□□□ 0.5
SMAD1-201ENST00000302085 I3L521 148 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 GPR37O15354 613 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 RBMXL2O75526 392 aaKnown RBP18.19■□□□□ 0.5
SMAD1-201ENST00000302085 ERVK-16P61578 105 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 ARL16Q0P5N6 197 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 AARDQ4LEZ3 155 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 SPANXN5Q5MJ07 72 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 WDR25Q64LD2 544 aaPredicted RBP18.19■□□□□ 0.5
SMAD1-201ENST00000302085 HSD17B13Q7Z5P4 300 aaPredicted RBP18.19■□□□□ 0.5
SMAD1-201ENST00000302085 SH3BGRL3Q9H299 93 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 CHODLQ9H9P2 273 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 MALRD1Q5VYJ5 2156 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 DOCK11Q5JSL3 2073 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 TRAV3A0A0B4J244 114 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 FGF2P09038 288 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 METTL15P1P0C7V9 234 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 OR2B8PP59922 312 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 ZNF266Q14584 549 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 TOR2AQ5JU69 321 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 TMEM140Q9NV12 185 aa18.19■□□□□ 0.5
SMAD1-201ENST00000302085 NDUFS7O75251 213 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 ARHGDIBP52566 201 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 RELBQ01201 579 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 ABHD12Q8N2K0 398 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 EIF4E3Q8N5X7 224 aaKnown RBP18.18■□□□□ 0.5
SMAD1-201ENST00000302085 C8orf46Q8TAG6 207 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 ZDHHC16Q969W1 377 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 SAT2Q96F10 170 aaPredicted RBP18.18■□□□□ 0.5
SMAD1-201ENST00000302085 ATP5SQ99766 215 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 MRPL20Q9BYC9 149 aaKnown RBP18.18■□□□□ 0.5
SMAD1-201ENST00000302085 SESN1Q9Y6P5 492 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 LRBAP50851 2863 aa18.18■□□□□ 0.5
SMAD1-201ENST00000302085 SPINK9Q5DT21 86 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 TMEM14EPQ6UXP3 125 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 DTD1Q8TEA8 209 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 OR4C12Q96R67 309 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 TMEM133Q9H2Q1 129 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 RFNGQ9Y644 331 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 PPIAL4CA0A0B4J2A2 164 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 A8MXK9 166 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 PPIAL4GP0DN37 164 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 OR4A16Q8NH70 328 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 OR9G1Q8NH87 305 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 ST6GALNAC6Q969X2 333 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 SLC35D1Q9NTN3 355 aa18.17■□□□□ 0.5
SMAD1-201ENST00000302085 F12P00748 615 aaPredicted RBP18.16■□□□□ 0.5
SMAD1-201ENST00000302085 DIAPH2-AS1Q14236 149 aa18.16■□□□□ 0.5
SMAD1-201ENST00000302085 OR10X1Q8NGY0 326 aa18.16■□□□□ 0.5
SMAD1-201ENST00000302085 MARVELD3Q96A59 401 aa18.16■□□□□ 0.5
SMAD1-201ENST00000302085 RHOVQ96L33 236 aa18.16■□□□□ 0.5
SMAD1-201ENST00000302085 CEBPZOSA8MTT3 80 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 IGKV1-16P04430 117 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 RNF224P0DH78 156 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 ATP6V0CP27449 155 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 LY6G5BQ8NDX9 201 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 PATZ1Q9HBE1 687 aaKnown RBP18.15■□□□□ 0.5
SMAD1-201ENST00000302085 REG1BP48304 166 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 DLX1P56177 255 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 POU2AF1Q16633 256 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 RTL8BQ17RB0 113 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 PXDC1Q5TGL8 231 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms