RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 OCC1Q8TAD7 63 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 CACNA1EQ15878 2313 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 C20orf202A1L168 122 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 K7EN84 100 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 HYPMO75409 117 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 IGHEP01854 428 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 GLB1P16278 677 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 COL8A2P25067 703 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 RAC3P60763 192 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 PCBD1P61457 104 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 C22orf15Q8WYQ4 148 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 C5orf30Q96GV9 206 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 RNF2Q99496 336 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF703Q9H7S9 590 aaPredicted RBP9.13□□□□□ -0.95
ZNF558-201ENST00000301475 GNB4Q9HAV0 340 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 SERPINA7P05543 415 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 IGLC2P0DOY2 106 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 IER3P46695 156 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 NXPH1P58417 271 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF816Q0VGE8 651 aaPredicted RBP9.13□□□□□ -0.95
ZNF558-201ENST00000301475 OR1L6Q8NGR2 347 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
ZNF558-201ENST00000301475 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 SIRPB1O00241 398 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 FCN1O00602 326 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 CXCL13O43927 109 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 SYNGR4O95473 234 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 GPX1P07203 203 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 RPL30P62888 115 aaKnown RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 Q0VG73 95 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 YRDCQ86U90 279 aaKnown RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 GGNQ86UU5 652 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 OR2M7Q8NG81 312 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 IL36BQ9NZH7 164 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 A0A0G2JMM0 328 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 A0A1W2PPB8 328 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 A0A1W2PRS3 328 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 KIR3DP1A8MWS1 328 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 RRHO14718 337 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 RHBDL1O75783 438 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 S1PR2O95136 353 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 CEACAM8P31997 349 aaPredicted RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 EDDM3BP56851 147 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 COTL1Q14019 142 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 PCOLCEQ15113 449 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 C9orf135Q5VTT2 229 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 MRPL21Q7Z2W9 205 aaKnown RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 SLC25A45Q8N413 288 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 SIGLECL1Q8N7X8 197 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
ZNF558-201ENST00000301475 PI4KAP42356 2102 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ASPMQ8IZT6 3477 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 AQP7O14520 342 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 NGFP01138 241 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 LGALS4P56470 323 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 SAPCD1Q5SSQ6 148 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 Q6ZN92 141 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 CADM4Q8NFZ8 388 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ABHD3Q8WU67 409 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 STARD4Q96DR4 205 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 GUCD1Q96NT3 240 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 TXN2Q99757 166 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 PRRG4Q9BZD6 226 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 NRN1Q9NPD7 142 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 UQCR10Q9UDW1 63 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 C5orf49A4QMS7 147 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF503-AS2A6NEH8 195 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 NKX6-3A6NJ46 265 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 BRWD1-AS2P59051 145 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 SUMO1P63165 101 aaKnown RBP9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ZXDAP98168 799 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 UNQ5815/PRO19632Q6UWF5 114 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 LINC00596Q86U02 117 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ST6GALNAC3Q8NDV1 305 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 ORAOV1Q8WV07 137 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 RAB1CQ92928 201 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 GAL3ST2Q9H3Q3 398 aa9.11□□□□□ -0.95
ZNF558-201ENST00000301475 MRPS17Q9Y2R5 130 aaKnown RBP9.11□□□□□ -0.95
ZNF558-201ENST00000301475 LOC105371242A0A075B767 164 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 A0A096LPE4 126 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 A0A1W2PPZ6 126 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 C17orf112F2Z3M2 114 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 AMTP48728 403 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 HNRNPA3P51991 378 aaKnown RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 CARD18P57730 90 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms