RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MAP1LC3BQ9GZQ8 125 aa10.78□□□□□ -0.68
HIF3A-204ENST00000300862 CXXC4Q9H2H0 198 aa10.78□□□□□ -0.68
HIF3A-204ENST00000300862 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
HIF3A-204ENST00000300862 LRRC30A6NM36 301 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 IGHG3P01860 377 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 GUSBP1Q15486 140 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 TMEM41BQ5BJD5 291 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 SLC35E4Q6ICL7 350 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 ACSM6Q6P461 480 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 TMEM14EPQ6UXP3 125 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 PSMG3Q9BT73 122 aaPredicted RBP10.77□□□□□ -0.68
HIF3A-204ENST00000300862 CISD1Q9NZ45 108 aaKnown RBP10.77□□□□□ -0.68
HIF3A-204ENST00000300862 HSPB7Q9UBY9 170 aa10.77□□□□□ -0.68
HIF3A-204ENST00000300862 SMG1Q96Q15 3661 aaKnown RBP10.77□□□□□ -0.68
HIF3A-204ENST00000300862 SMCO3A2RU48 225 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 MKRN2OSH3BPM6 223 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 CLDN34H7C241 214 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 CYB5R3P00387 301 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-204ENST00000300862 EIF4EBP1Q13541 118 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-204ENST00000300862 CD177Q8N6Q3 437 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 LHX4Q969G2 390 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 FAM234AQ9H0X4 552 aa10.77□□□□□ -0.69
HIF3A-204ENST00000300862 C1QTNF9BB2RNN3 333 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 SERF2P84101 59 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 TFF3Q07654 80 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 GATAD1Q8WUU5 269 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 LRRC29Q8WV35 223 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 TMEM242Q9NWH2 141 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 DUSP13Q9UII6 198 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
HIF3A-204ENST00000300862 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 ZNF737O75373 536 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 SNRPCP09234 159 aaKnown RBP10.76□□□□□ -0.69
HIF3A-204ENST00000300862 P0C879 139 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 GZMBP10144 247 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 MSMO1Q15800 293 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 LRP11Q86VZ4 500 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 OR4X1Q8NH49 305 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-204ENST00000300862 ROS1P08922 2347 aa10.76□□□□□ -0.69
HIF3A-204ENST00000300862 IGHV3OR15-7A0A075B7D8 119 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 IGHV1-18A0A0C4DH31 117 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 AMBPP02760 352 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 EGR1P18146 543 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 COX5AP20674 150 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 GCH1P30793 250 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 PNRC1Q12796 327 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-204ENST00000300862 CATR1Q13166 79 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 COTL1Q14019 142 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 JOSD1Q15040 202 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-204ENST00000300862 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 H2BFWTQ7Z2G1 175 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 DTD1Q8TEA8 209 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 PITPNC1Q9UKF7 332 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 PLCE1Q9P212 2302 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 IGHV2OR16-5A0A0B4J2B6 119 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 A8MWP6 167 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 FAM90A26D6RGX4 464 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 FGF7P21781 194 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 SSX2Q16385 188 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 ZNF718Q3SXZ3 478 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 NCR3LG1Q68D85 454 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 SDF2L1Q9HCN8 221 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 VAX2Q9UIW0 290 aa10.75□□□□□ -0.69
HIF3A-204ENST00000300862 TGOLN2O43493 480 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 SPCS3P61009 180 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 DEFB109BQ30KR1 87 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 SMIM21Q3B7S5 101 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 MRGPRGQ86SM5 289 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 VKORC1L1Q8N0U8 176 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 ZBTB34Q8NCN2 500 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 PMS2P5A8MQ11 134 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 FTH1P19P0C7X4 201 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 PRDX2P32119 198 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 ACSF3Q4G176 576 aaPredicted RBP10.74□□□□□ -0.69
HIF3A-204ENST00000300862 UTF1Q5T230 341 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 OR10P1Q8NGE3 313 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
HIF3A-204ENST00000300862 RPUSD4Q96CM3 377 aaKnown RBP10.74□□□□□ -0.69
HIF3A-204ENST00000300862 TAAR6Q96RI8 345 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 AGMATQ9BSE5 352 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 SPTBN2O15020 2390 aa10.74□□□□□ -0.69
HIF3A-204ENST00000300862 PRR33A8MZF0 331 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 AQP7O14520 342 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 DVL1O14640 695 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 PROP1O75360 226 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 TNFSF13O75888 250 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 CLDN14O95500 239 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 KITLGP21583 273 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 BMP5P22003 454 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 FFAR4Q5NUL3 377 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 VHLLQ6RSH7 139 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 TGIF2LXQ8IUE1 241 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms