RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 QTRT1Q9BXR0 403 aaKnown RBP10.95□□□□□ -0.66
TVP23A-201ENST00000299866 GNB4Q9HAV0 340 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 ZNF716A6NP11 495 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 FAM90A26D6RGX4 464 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 ARL14EPLP0DKL9 152 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 ABHD3Q8WU67 409 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 APH1AQ96BI3 265 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 RNF2Q99496 336 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 SF3B5Q9BWJ5 86 aaKnown RBP10.95□□□□□ -0.66
TVP23A-201ENST00000299866 NRN1Q9NPD7 142 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.95□□□□□ -0.66
TVP23A-201ENST00000299866 LRRC30A6NM36 301 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 GPX1P07203 203 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 C1orf174Q8IYL3 243 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 PRDM14Q9GZV8 571 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 RARRES3Q9UL19 164 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
TVP23A-201ENST00000299866 HYPMO75409 117 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 S1PR2O95136 353 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 RPL30P62888 115 aaKnown RBP10.94□□□□□ -0.66
TVP23A-201ENST00000299866 SLC25A45Q8N413 288 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 DEPPQ9NTK1 212 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 IL36BQ9NZH7 164 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 SLC45A2Q9UMX9 530 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 GDF9O60383 454 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 CA6P23280 308 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 HTD2P86397 168 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 OR8I2Q8N0Y5 310 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 Q8N976 141 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 AGBL5Q8NDL9 886 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 FREM1Q5H8C1 2179 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 FAM186AA6NE01 2351 aa10.94□□□□□ -0.66
TVP23A-201ENST00000299866 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
TVP23A-201ENST00000299866 NXPH1P58417 271 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 LINC00205P59089 165 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 PSG7Q13046 419 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 PRRG4Q9BZD6 226 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 ZNF703Q9H7S9 590 aaPredicted RBP10.93□□□□□ -0.66
TVP23A-201ENST00000299866 NAT8BQ9UHF3 227 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 PRUNE2Q8WUY3 3088 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 ESDP10768 282 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 NTF3P20783 257 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 ARF1P84077 181 aaKnown RBP10.93□□□□□ -0.66
TVP23A-201ENST00000299866 SAPCD1Q5SSQ6 148 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 FAM19A2Q8N3H0 131 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 OR10D3Q8NH80 312 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 OR2D2Q9H210 308 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 A0A0G2JMM0 328 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 A0A1W2PPB8 328 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 A0A1W2PRS3 328 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 NKX6-3A6NJ46 265 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 GJE1A6NN92 205 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 KIR3DP1A8MWS1 328 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 K7EN84 100 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 IGLC2P0DOY2 106 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 DOCK7Q96N67 2140 aa10.93□□□□□ -0.66
TVP23A-201ENST00000299866 CEP290O15078 2479 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 TRBV6-6A0A0A6YYG2 114 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 CTRLP40313 264 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
TVP23A-201ENST00000299866 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 ST6GALNAC3Q8NDV1 305 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 RCHY1Q96PM5 261 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 UHRF2Q96PU4 802 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 C17orf98A8MV24 154 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 SSR4P51571 173 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 TCL1AP56279 114 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 COLCA1Q6ZS62 124 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 ERASQ7Z444 233 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 MMD2Q8IY49 270 aa10.92□□□□□ -0.66
TVP23A-201ENST00000299866 RNF212BA8MTL3 300 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 RRHO14718 337 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 CD1BP29016 333 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 EPHA8P29322 1005 aaPredicted RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 KLF3P57682 345 aaPredicted RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 RPL31P62899 125 aaKnown RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 PCOLCEQ15113 449 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 WIPI1Q5MNZ9 446 aaPredicted RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 PRDM6Q9NQX0 595 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 ZNF253O75346 499 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 LGALS4P56470 323 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 Q0VG73 95 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 MIC13Q5XKP0 118 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 LYG1Q8N1E2 194 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 ORAOV1Q8WV07 137 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 GAL3ST2Q9H3Q3 398 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 YTHDF2Q9Y5A9 579 aaKnown RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 ANKRD30BLA7E2S9 258 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 A8MXE2 369 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 PDLIM3Q53GG5 364 aaPredicted RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 SPATA46Q5T0L3 261 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 LCN12Q6JVE5 192 aa10.91□□□□□ -0.66
TVP23A-201ENST00000299866 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
TVP23A-201ENST00000299866 OR2H2O95918 312 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms