RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PSMB11A5LHX3 300 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PRR19A6NJB7 356 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 FOXI3A8MTJ6 420 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PRSS2P07478 247 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PUSL1Q8N0Z8 303 aaKnown RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 C5orf66Q9H5L9 145 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 B4E171 279 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TSPAN7P41732 249 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SRIP30626 198 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ATP5J2P56134 94 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LY75O60449 1722 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 C9JCJ5 164 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 FSTP19883 344 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CTSSP25774 331 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF256Q9Y2P7 627 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 M0QZK8 103 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LCN2P80188 198 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RELQ04864 619 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 COX19Q49B96 90 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GPR82Q96P67 336 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PIN1P1O15428 100 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PPP1R17O96001 155 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 OR1P1Q8NH06 330 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 OR51M1Q9H341 326 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 G6PC2Q9NQR9 355 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PILRBQ9UKJ0 227 aa11.61□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GDF9O60383 454 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MFAP4P55083 255 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 NUP37Q8NFH4 326 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RRHO14718 337 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 H2BFSP57053 126 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ST6GALNAC3Q8NDV1 305 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SAP25Q8TEE9 199 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SP9P0CG40 484 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 STAG3L2P0CL84 134 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MAP1LC3AQ9H492 121 aa11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
CHRFAM7A-201ENST00000299847 IGKV1D-42A0A075B6H8 117 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RFPL3SP0C7P2 107 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SERF2P84101 59 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LAMB2P55268 1798 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 AHRRA9YTQ3 701 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RAMP1O60894 148 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MC5RP33032 325 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TIMP4Q99727 224 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 DNAJC4Q9NNZ3 241 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GAGE10A6NGK3 116 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SNAI2O43623 268 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RND3P61587 244 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 NPIPB3Q92617 1050 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 A0A1W2PS18 150 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LEPROTL1O95214 131 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RECKO95980 971 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 NMBP08949 121 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MOB4Q9Y3A3 225 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 KLF4O43474 513 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 C18orf15Q96N68 181 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SIGLEC12Q96PQ1 595 aa11.59□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SIAH2O43255 324 aa11.58□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SHISA5Q8N114 240 aa11.58□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TGFAP01135 160 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR11H4Q8NGC9 324 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 P2RY6Q15077 328 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 LINC00305Q7Z4B0 112 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 MMD2Q8IY49 270 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 DDA1Q9BW61 102 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TFF1P04155 84 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ISG15P05161 165 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FGF5P12034 268 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 LBHQ53QV2 105 aaPredicted RBP11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 COL5A1-AS1Q5SY13 56 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR13C6PQ8NH95 151 aa11.58□□□□□ -0.56
CHRFAM7A-201ENST00000299847 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms