RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 UCP2P55851 309 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 RND3P61587 244 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 ITLN1Q8WWA0 313 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 TMEM222Q9H0R3 208 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 HLA-DQB1P01920 261 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 RND2P52198 227 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF107Q9UII5 783 aaPredicted RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 TNFSF14O43557 240 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 GPR6P46095 362 aaPredicted RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 SRSF4Q08170 494 aaKnown RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 UNC119Q13432 240 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 OR11H4Q8NGC9 324 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 GAPDHP04406 335 aaKnown RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF362Q5T0B9 420 aaPredicted RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 SPRED2Q7Z698 418 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 CISD1Q9NZ45 108 aaKnown RBP13.87□□□□□ -0.19
SSRP1-202ENST00000293880 IGHV3OR16-13A0A075B7E8 117 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 IGHV3-74A0A0B4J1X5 117 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 PSMB11A5LHX3 300 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 A8MWL6 223 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 MOSP00540 346 aa13.87□□□□□ -0.19
SSRP1-202ENST00000293880 NINQ8N4C6 2090 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF818PQ6ZRF7 136 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSRP1-202ENST00000293880 MIA3Q5JRA6 1907 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 LOC105371267A0A1B0GV96 52 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 H2BFSP57053 126 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 JOSD1Q15040 202 aaPredicted RBP13.86□□□□□ -0.19
SSRP1-202ENST00000293880 C1orf185Q5T7R7 199 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ASCL4Q6XD76 172 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 TMEM183AQ8IXX5 376 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ZBTB34Q8NCN2 500 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 DUX5Q96PT3 197 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 MOB4Q9Y3A3 225 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 IFITM2Q01629 132 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 GALNT14Q96FL9 552 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ARAP2Q8WZ64 1704 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 TMEM262E9PQX1 116 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 AGAP20933 346 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 CBLN1P23435 193 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 UNQ5815/PRO19632Q6UWF5 114 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 TRAV21A0A0B4J279 112 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ASAH2BP0C7U1 165 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF124Q15973 351 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 IMMP2LQ96T52 175 aa13.86□□□□□ -0.19
SSRP1-202ENST00000293880 DPRXA6NFQ7 191 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 C16orf97H3BN30 126 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 FOXS1O43638 330 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 LDLRAD2Q5SZI1 272 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 TRBV5-3A0A0A0MS03 114 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 A0A0J9YW62 118 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 NGFRP08138 427 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 FOXA3P55318 350 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-202ENST00000293880 FGF12P61328 243 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 MEF2BQ02080 365 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-202ENST00000293880 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-202ENST00000293880 TEX29Q8N6K0 151 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 CNTRLQ7Z7A1 2325 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 THY1P04216 161 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 WDR54Q9H977 334 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 IGHV1-45A0A0A0MS14 117 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 FGFRL1Q8N441 504 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 AQP3Q92482 292 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 LINC00614P0C842 121 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 TMEM45BQ96B21 275 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 TIMP4Q99727 224 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 CALYQ9NYX4 217 aa13.85□□□□□ -0.19
SSRP1-202ENST00000293880 OR5AN1Q8NGI8 311 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 JKAMPQ9P055 326 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 NPIPB8E9PQR5 432 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 NPIPB9F8W1W9 429 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 ATXN7O15265 892 aaPredicted RBP13.84□□□□□ -0.19
SSRP1-202ENST00000293880 NPIPB7O75200 414 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 ISG15P05161 165 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 PPP1R3EQ9H7J1 279 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 FOXI3A8MTJ6 420 aaPredicted RBP13.84□□□□□ -0.19
SSRP1-202ENST00000293880 C5orf66Q9H5L9 145 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 FUT5Q11128 374 aa13.84□□□□□ -0.19
SSRP1-202ENST00000293880 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
SSRP1-202ENST00000293880 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
SSRP1-202ENST00000293880 CTSBP07858 339 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 MEF2CQ06413 473 aaPredicted RBP13.83□□□□□ -0.2
SSRP1-202ENST00000293880 TMEM170BQ5T4T1 132 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 SCNM1Q9BWG6 230 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 hCG_38984A0A1B0GV85 526 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 ZNF815PA8K554 130 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 GPX1P07203 203 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 C1orf122Q6ZSJ8 110 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 PSMG3Q9BT73 122 aaPredicted RBP13.83□□□□□ -0.2
SSRP1-202ENST00000293880 DOCK5Q9H7D0 1870 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 DCAF10Q5QP82 559 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 FAM19A2Q8N3H0 131 aa13.83□□□□□ -0.2
SSRP1-202ENST00000293880 SLC25A38Q96DW6 304 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms