RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CNIH1O95406 144 aa19.33■□□□□ 0.68
U2AF1-201ENST00000291552 FRMD6-AS1P0C7T7 363 aa19.33■□□□□ 0.68
U2AF1-201ENST00000291552 CD40LGP29965 261 aa19.33■□□□□ 0.68
U2AF1-201ENST00000291552 SRSF7Q16629 238 aaKnown RBP eCLIP19.33■□□□□ 0.68
U2AF1-201ENST00000291552 SHOXO15266 292 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 RBMXL2O75526 392 aaKnown RBP19.32■□□□□ 0.68
U2AF1-201ENST00000291552 GALP22466 123 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 DUTP33316 252 aaKnown RBP19.32■□□□□ 0.68
U2AF1-201ENST00000291552 GABARAPL2P60520 117 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 ARFRP1Q13795 201 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 UBE2UQ5VVX9 321 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 GINS4Q9BRT9 223 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 RAB26Q9ULW5 256 aa19.32■□□□□ 0.68
U2AF1-201ENST00000291552 C13orf42A0A1B0GVH6 325 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 ANKRD34BA5PLL1 514 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 BRI3O95415 125 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 IGLV1-51P01701 117 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 TAGLNQ01995 201 aaKnown RBP19.31■□□□□ 0.68
U2AF1-201ENST00000291552 DYRK1AQ13627 763 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 RTL8BQ17RB0 113 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 OR4C12Q96R67 309 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 TINAGL1Q9GZM7 467 aaPredicted RBP19.31■□□□□ 0.68
U2AF1-201ENST00000291552 ATG5Q9H1Y0 275 aa19.31■□□□□ 0.68
U2AF1-201ENST00000291552 METTL21EPA6NDL7 271 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 CRYZL1O95825 349 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 APELAP0DMC3 54 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 DTYMKP23919 212 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 IDO2Q6ZQW0 420 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 RCHY1Q96PM5 261 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 RANGRFQ9HD47 186 aaPredicted RBP19.3■□□□□ 0.68
U2AF1-201ENST00000291552 ADAM30Q9UKF2 790 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 STUB1Q9UNE7 303 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 RBM7Q9Y580 266 aaKnown RBP19.3■□□□□ 0.68
U2AF1-201ENST00000291552 SACSQ9NZJ4 4579 aa19.3■□□□□ 0.68
U2AF1-201ENST00000291552 STARD9Q9P2P6 4700 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 TRBV12-3P01733 135 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 RRASP10301 218 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 TALDO1P37837 337 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 UBE2KP61086 200 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 CBX3Q13185 183 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 KLF5Q13887 457 aaPredicted RBP19.29■□□□□ 0.68
U2AF1-201ENST00000291552 PRSS8Q16651 343 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 IL34Q6ZMJ4 242 aa19.29■□□□□ 0.68
U2AF1-201ENST00000291552 TXNL4BQ9NX01 149 aaKnown RBP19.29■□□□□ 0.68
U2AF1-201ENST00000291552 A0A0G2JLM5 398 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 ZP3P21754 424 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 FGF9P31371 208 aaPredicted RBP19.28■□□□□ 0.68
U2AF1-201ENST00000291552 CDNFQ49AH0 187 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 SPARTQ8N0X7 666 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 Q8N1Y9 231 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 TEX45Q8NA69 505 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 ADAD2Q8NCV1 583 aaKnown RBP19.28■□□□□ 0.68
U2AF1-201ENST00000291552 NUDCD2Q8WVJ2 157 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 ADTRPQ96IZ2 230 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 TMEM68Q96MH6 324 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 RSRP1Q9BUV0 290 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 ELOVL1Q9BW60 279 aa19.28■□□□□ 0.68
U2AF1-201ENST00000291552 NOTOA8MTQ0 251 aa19.27■□□□□ 0.68
U2AF1-201ENST00000291552 J3QRK9 145 aa19.27■□□□□ 0.68
U2AF1-201ENST00000291552 MRPS14O60783 128 aaKnown RBP19.27■□□□□ 0.68
U2AF1-201ENST00000291552 PSMB9P28065 219 aa19.27■□□□□ 0.68
U2AF1-201ENST00000291552 ZNF343Q6P1L6 599 aa19.27■□□□□ 0.68
U2AF1-201ENST00000291552 COA4Q9NYJ1 87 aa19.27■□□□□ 0.68
U2AF1-201ENST00000291552 CSMD3Q7Z407 3707 aa19.27■□□□□ 0.67
U2AF1-201ENST00000291552 MSGN1A6NI15 193 aa19.26■□□□□ 0.67
U2AF1-201ENST00000291552 TNXAQ16473 311 aa19.26■□□□□ 0.67
U2AF1-201ENST00000291552 VMA21Q3ZAQ7 101 aa19.26■□□□□ 0.67
U2AF1-201ENST00000291552 HACD4Q5VWC8 232 aa19.26■□□□□ 0.67
U2AF1-201ENST00000291552 SRSF12Q8WXF0 261 aaKnown RBP19.26■□□□□ 0.67
U2AF1-201ENST00000291552 IGKV1D-13A0A0B4J2D9 117 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 TMEM235A6NFC5 223 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 ERICH4A6NGS2 130 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 SSX5O60225 188 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 IGLV2-14P01704 120 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 SAA1P0DJI8 122 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-201ENST00000291552 IGKV1-13P0DP09 117 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 NFYAP23511 347 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-201ENST00000291552 SYNJ2BPP57105 145 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 RPL30P62888 115 aaKnown RBP19.25■□□□□ 0.67
U2AF1-201ENST00000291552 ZNF645Q8N7E2 425 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 OSR1Q8TAX0 266 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-201ENST00000291552 ST6GALNAC5Q9BVH7 336 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 ZNF430Q9H8G1 570 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-201ENST00000291552 LYSTQ99698 3801 aa19.25■□□□□ 0.67
U2AF1-201ENST00000291552 C3orf84H3BNL1 204 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 HLA-DQB1P01920 261 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 OR9G9P0C7N8 305 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 AADACP22760 399 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 ZNF45Q02386 682 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 ARL6IP1Q15041 203 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 C10orf55Q5SWW7 151 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 ANKRD13BQ86YJ7 626 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 OR9G4Q8NGQ1 327 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 LGALS14Q8TCE9 139 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 PHB2Q99623 299 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 PEF1Q9UBV8 284 aaKnown RBP19.24■□□□□ 0.67
U2AF1-201ENST00000291552 DAPK2Q9UIK4 370 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 OR2W1Q9Y3N9 320 aa19.24■□□□□ 0.67
U2AF1-201ENST00000291552 IGHV4-30-4P0DP06 118 aa19.23■□□□□ 0.67
U2AF1-201ENST00000291552 ACOT12Q8WYK0 555 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms