RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 GPR12P47775 334 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 CD81P60033 236 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 TMEM42Q69YG0 159 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 FAM53AQ6NSI3 398 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-201ENST00000286835 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 GCGP01275 180 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 RIPPLY2Q5TAB7 128 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-201ENST00000286835 MANBALQ9NQG1 85 aa11.34□□□□□ -0.59
SCAF4-201ENST00000286835 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 MPC1Q9Y5U8 109 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 J3QT63 122 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 EREGO14944 169 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 C1QTNF9P0C862 333 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 CRISP2P16562 243 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 IER3P46695 156 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 VKORC1L1Q8N0U8 176 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-201ENST00000286835 DEPPQ9NTK1 212 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 RNF115Q9Y4L5 304 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM30CPA0ZSE6 113 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 M0R1X1 148 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 HOXA4Q00056 320 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-201ENST00000286835 RAB31Q13636 194 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-201ENST00000286835 MDP1Q86V88 176 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 SIGLECL1Q8N7X8 197 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 DERL1Q9BUN8 251 aa11.33□□□□□ -0.6
SCAF4-201ENST00000286835 ODAMA1E959 279 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 GZMHP20718 246 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 CBLN1P23435 193 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 CCKARP32238 428 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 GNB2P62879 340 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 PRSS8Q16651 343 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM256Q8N2U0 113 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 HSPB9Q9BQS6 159 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 PINLYPA6NC86 204 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF891A8MT65 544 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-201ENST00000286835 DNPH1O43598 174 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 TPPP2P59282 170 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 GGNQ86UU5 652 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 OR10G8Q8NGN5 311 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 REV3LO60673 3130 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 CFAP54Q96N23 3096 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 HEATR1Q9H583 2144 aaKnown RBP11.32□□□□□ -0.6
SCAF4-201ENST00000286835 PRRG2O14669 202 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 WNT9BO14905 357 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 SPINT2O43291 252 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-201ENST00000286835 OR7C2O60412 319 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 HAND1O96004 215 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 CEACAM1P13688 526 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 KIAA1644Q3SXP7 199 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 PIEZO2Q9H5I5 2752 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 NAT8BQ9UHF3 227 aa11.32□□□□□ -0.6
SCAF4-201ENST00000286835 KLF7O75840 302 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-201ENST00000286835 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 RBPJQ06330 500 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 SCCPDHQ8NBX0 429 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 C17orf98A8MV24 154 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 SLC17A3O00476 420 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 ACP1P24666 158 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 RPP30P78346 268 aaKnown RBP11.31□□□□□ -0.6
SCAF4-201ENST00000286835 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 TIPARPQ7Z3E1 657 aaKnown RBP11.31□□□□□ -0.6
SCAF4-201ENST00000286835 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
SCAF4-201ENST00000286835 PROK2Q9HC23 129 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 OR5R1Q8NH85 324 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 A6NNC1 897 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 MT-CO2P00403 227 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 HBZP02008 142 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 IL3RAP26951 378 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms