RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FAM74A7A6NL05 159 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 PPIAL4DF5H284 164 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 YPEL1O60688 119 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 ATG12O94817 140 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 SFTA3P0C7M3 94 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 OR9G9P0C7N8 305 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 PPIAL4FP0DN26 164 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 SLC25A6P12236 298 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 RPL31P62899 125 aaKnown RBP14.81□□□□□ -0.04
CAPN1-201ENST00000279247 BAXQ07812 192 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 FAM74A3Q4VXF1 159 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 PUSL1Q8N0Z8 303 aaKnown RBP14.81□□□□□ -0.04
CAPN1-201ENST00000279247 YPEL2Q96QA6 119 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 QTRT1Q9BXR0 403 aaKnown RBP14.81□□□□□ -0.04
CAPN1-201ENST00000279247 NDRG3Q9UGV2 375 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 PPIAL4AQ9Y536 164 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 ARHGAP32A7KAX9 2087 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 NKX6-3A6NJ46 265 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 LY6HO94772 140 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 CCL20P78556 96 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 NCMAPQ5T1S8 102 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 UQCC3Q6UW78 93 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 S1PR3Q99500 378 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 TMEM106BQ9NUM4 274 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 GFOD1Q9NXC2 390 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 TRAV3A0A0B4J244 114 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 TRAV38-1A0A0B4J264 116 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 ELLP55199 621 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-201ENST00000279247 DLX1P56177 255 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 AKR1C8PQ5T2L2 129 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 ZNF66Q6ZN08 573 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 SCGB1C1Q8TD33 95 aa14.8□□□□□ -0.04
CAPN1-201ENST00000279247 REG1BP48304 166 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 DTD1Q8TEA8 209 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 SFT2D1Q8WV19 159 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 NKX6-2Q9C056 277 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-201ENST00000279247 PLXNB1O43157 2135 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 UTP20O75691 2785 aaKnown RBP14.79□□□□□ -0.04
CAPN1-201ENST00000279247 F2RL2O00254 374 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 MMP9P14780 707 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 Q8TCH9 128 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 HINT2Q9BX68 163 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 VSIRQ9H7M9 311 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 PIGBOS1A0A0B4J2F0 54 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 TMEM178BH3BS89 294 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 OPN1MWP04001 364 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 OPN1MW2P0DN77 364 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 OPN1MW3P0DN78 364 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 AKR1C3P42330 323 aa14.79□□□□□ -0.04
CAPN1-201ENST00000279247 MRPS11P82912 194 aaKnown RBP14.79□□□□□ -0.04
CAPN1-201ENST00000279247 HRNRQ86YZ3 2850 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-201ENST00000279247 FCN3O75636 299 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 OR4C12Q96R67 309 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 RARRES2Q99969 163 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 TET2Q6N021 2002 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-201ENST00000279247 SIAH2O43255 324 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 CGB3P0DN86 165 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 CGB7P0DN87 165 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 CHRNB4P30926 498 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 SLC38A11Q08AI6 406 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 GUK1Q16774 197 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 HAGHQ16775 308 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 C1orf87Q8N0U7 546 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 TOLLIPQ9H0E2 274 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
CAPN1-201ENST00000279247 DFFBO76075 338 aa14.77□□□□□ -0.04
CAPN1-201ENST00000279247 WNT2P09544 360 aa14.77□□□□□ -0.04
CAPN1-201ENST00000279247 ATF4P18848 351 aaPredicted RBP14.77□□□□□ -0.04
CAPN1-201ENST00000279247 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.04
CAPN1-201ENST00000279247 IDI2-AS1Q9NZ38 188 aa14.77□□□□□ -0.04
CAPN1-201ENST00000279247 SVEP1Q4LDE5 3571 aa14.77□□□□□ -0.04
CAPN1-201ENST00000279247 OR13C7P0DN81 318 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 MYOD1P15172 320 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 SNCAP37840 140 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 UQCRFS1P47985 274 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 NPBWR1P48145 328 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 ERVK-16P61578 105 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 HBG1P69891 147 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 HBG2P69892 147 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 PAX5Q02548 391 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF525Q8N782 197 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 OR4A16Q8NH70 328 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 C20orf24Q9BUV8 137 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 HSPB7Q9UBY9 170 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 MYO18BQ8IUG5 2567 aa14.77□□□□□ -0.05
CAPN1-201ENST00000279247 hADV38S2A0JD32 116 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 HMGB3O15347 200 aaKnown RBP14.76□□□□□ -0.05
CAPN1-201ENST00000279247 APOBEC3AP31941 199 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-201ENST00000279247 CBLN2Q8IUK8 224 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 H2AFB1P0C5Y9 115 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 TEX36Q5VZQ5 186 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 ETV3LQ6ZN32 361 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 SVBPQ8N300 66 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 MUC15Q8N387 334 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 FGF8P55075 233 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-201ENST00000279247 TAS2R30P59541 319 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 LCN15Q6UWW0 184 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 ST6GALNAC3Q8NDV1 305 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 DIRC2Q96SL1 478 aa14.76□□□□□ -0.05
CAPN1-201ENST00000279247 MS4A5Q9H3V2 200 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms