RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TRAV9-1A0A075B6T8 112 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 CD300LBA8K4G0 201 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 ESDP10768 282 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 CNN1P51911 297 aaKnown RBP8.69□□□□□ -1.02
UPF3B-201ENST00000276201 FOXL1Q12952 345 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 MOB1BQ7L9L4 216 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 PIGCQ92535 297 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 OR4C12Q96R67 309 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 PARLQ9H300 379 aa8.69□□□□□ -1.02
UPF3B-201ENST00000276201 A0A0J9YW62 118 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 A1L4Q6 167 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 CLDN1O95832 211 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 IGKV1-39P01597 117 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 IGKV1D-39P04432 117 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 CD55P08174 381 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 COX5BP10606 129 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 BCL3P20749 454 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF837Q96EG3 531 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 NEIL1Q96FI4 390 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 WDYHV1Q96HA8 205 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 DIRC2Q96SL1 478 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 PCGF1Q9BSM1 259 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 FKBP11Q9NYL4 201 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF705GA8MUZ8 300 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 WDR1O75083 606 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 GYPAP02724 150 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 LINC00614P0C842 121 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 LHX2P50458 406 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 SLC38A11Q08AI6 406 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 CEACAM21Q3KPI0 293 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 C1orf185Q5T7R7 199 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 Q6ZRM9 215 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF573Q86YE8 665 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 RPP25LQ8N5L8 163 aaKnown RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 OR10V1Q8NGI7 309 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
UPF3B-201ENST00000276201 CACNG5Q9UF02 275 aa8.68□□□□□ -1.02
UPF3B-201ENST00000276201 YLPM1P49750 1951 aaKnown RBP8.67□□□□□ -1.02
UPF3B-201ENST00000276201 SS18L1O75177 396 aaPredicted RBP8.67□□□□□ -1.02
UPF3B-201ENST00000276201 IGKV1-5P01602 117 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 PSG2P11465 335 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 IDH3GP51553 393 aaPredicted RBP8.67□□□□□ -1.02
UPF3B-201ENST00000276201 RANP62826 216 aaKnown RBP8.67□□□□□ -1.02
UPF3B-201ENST00000276201 CDSNQ15517 529 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 MSMO1Q15800 293 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 RAET1LQ5VY80 246 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF808Q8N4W9 903 aaPredicted RBP8.67□□□□□ -1.02
UPF3B-201ENST00000276201 TMEM45BQ96B21 275 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 FOXB1Q99853 325 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 TMEM147Q9BVK8 224 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 SRXN1Q9BYN0 137 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 NAGKQ9UJ70 344 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 PXMP4Q9Y6I8 212 aa8.67□□□□□ -1.02
UPF3B-201ENST00000276201 MARCH11A6NNE9 402 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 OR4A8P0C604 315 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 CLDN18P56856 261 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 ERVS71-1P61550 626 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 SELENOTP62341 195 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 TEX38Q6PEX7 206 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 SEM1Q6ZVN7 128 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 NAXEQ8NCW5 288 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 OR5A2Q8NGI9 324 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 OR10J5Q8NHC4 309 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 FUT9Q9Y231 359 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 RTTNQ86VV8 2226 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 RNF212BA8MTL3 300 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 P0C879 139 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 SRYQ05066 204 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 ZBTB34Q8NCN2 500 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 GMPPAQ96IJ6 420 aaPredicted RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 GPR35Q9HC97 309 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
UPF3B-201ENST00000276201 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
UPF3B-201ENST00000276201 IGHV3-15A0A0B4J1V0 119 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 F6UZH7 168 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 H3BP45 60 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 DLEU1O43261 78 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 PDE6DO43924 150 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 YPEL1O60688 119 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 TNFSF13O75888 250 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 IGKV1D-33P01593 117 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 IGKV1-33P01594 117 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 IGLV2-14P01704 120 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 PDCD1Q15116 288 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 ZNF585BQ52M93 769 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 TEX43Q6ZNM6 134 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms