RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 LOC107984156A0A0G2JMH3 177 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 TRGC1P0CF51 173 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 ARL17AQ8IVW1 177 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 A0A1B0GV72 72 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 C1QAP02745 245 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 HOXB1P14653 301 aaPredicted RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 Q6ZS52 159 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 MRPS18BQ9Y676 258 aaKnown RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 LEPROTL1O95214 131 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 EML2O95834 649 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 IGHMP01871 453 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 ARL14EPLP0DKL9 152 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 PCGF1Q9BSM1 259 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 LRRK1Q38SD2 2015 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 TRBV5-7A0A0A0MS05 114 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 DANCRP0C864 163 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 C1orf100Q5SVJ3 147 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 RPL27AP46776 148 aaKnown RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 CDX1P47902 265 aaPredicted RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 FOXC1Q12948 553 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 PQLC2LA1A4F0 135 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM250H0YL14 139 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 NDUFB4O95168 129 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 EFNB2P52799 333 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 DCAF12L2Q5VW00 463 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 SPSB4Q96A44 273 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 PPP1R3EQ9H7J1 279 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 NPDC1Q9NQX5 325 aaPredicted RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 MYF5P13349 255 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 WNT5AP41221 380 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 PRSS8Q16651 343 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 APELAP0DMC3 54 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 DRD3P35462 400 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 TCF23Q7RTU1 214 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 DUSP15Q9H1R2 295 aaPredicted RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 FAM206AQ9NX38 181 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 DENND4AQ7Z401 1863 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 IGHV3-13P01766 116 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 IGHV3-7P01780 117 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 LINC00869P0C866 280 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 CA7P43166 264 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 SAMD13Q5VXD3 122 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 TREM2Q9NZC2 230 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 SF3B6Q9Y3B4 125 aaKnown RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 SOX21Q9Y651 276 aaPredicted RBP6.9□□□□□ -1.3
LIMD1-201ENST00000273317 NDUFA2O43678 99 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 KRTCAP3Q53RY4 240 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 LHX8Q68G74 356 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 GGACTQ9BVM4 153 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 PLA2G2FQ9BZM2 168 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 A0A0G2JMZ2 1700 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 LRRC37A2A6NM11 1700 aa6.9□□□□□ -1.3
LIMD1-201ENST00000273317 IGHV5-10-1A0A0J9YXX1 117 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 LIMS1P48059 325 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 UCNP55089 124 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 C1orf185Q5T7R7 199 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.31
LIMD1-201ENST00000273317 A0A1B0GV90 55 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 J3QW42 95 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 DNAL4O96015 105 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 PATE4P0C8F1 98 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 NPBWR2P48146 333 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 TAF15Q92804 592 aaKnown RBP eCLIP6.9□□□□□ -1.31
LIMD1-201ENST00000273317 CCL3P10147 92 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 ANOS1P23352 680 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 SOSTQ9BQB4 213 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 NUBP1P53384 320 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 THSD7AQ9UPZ6 1657 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 HCFC1P51610 2035 aa6.9□□□□□ -1.31
LIMD1-201ENST00000273317 IL4P05112 153 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
LIMD1-201ENST00000273317 DLX6P56179 175 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 C1QL3Q5VWW1 255 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF146Q15072 292 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 NPIPB13A6NJU9 1138 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 NPIPB4C9JG80 1138 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 PCP4P48539 62 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 NAV3Q8IVL0 2385 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 TRGC2P03986 189 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 RIPPLY3P57055 190 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 KIR2DL4Q99706 377 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 WISP3O95389 354 aaPredicted RBP6.89□□□□□ -1.31
LIMD1-201ENST00000273317 LOXL3P58215 753 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 HKR1P10072 659 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 KLK2P20151 261 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 PLAUP00749 431 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 FGF5P12034 268 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms