RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FAM90A20PA6NIJ5 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A8PA6NJQ4 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A7PA6NKC0 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A22PA8MWA6 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A12PA8MX19 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A5PA8MXJ8 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A23PA8MXZ1 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 C5orf67F2Z3F1 127 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PRSS2P07478 247 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A15PP0C7V4 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A13PP0C7W8 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A14PP0C7W9 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A24PP0C7X0 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PAPPA-AS1Q5QFB9 102 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 C10orf128Q5T292 105 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 AQP3Q92482 292 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 GCSAMQ8N6F7 178 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 OR1P1Q8NH06 330 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 OR5AC2Q9NZP5 309 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 JKAMPQ9P055 326 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PPIAL4EA0A075B759 164 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PPIAL4DF5H284 164 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PPIAL4FP0DN26 164 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 VSIG10L2P0DP72 767 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 ZNF385CQ66K41 422 aaPredicted RBP15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 ZAR1Q86SH2 424 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 GEMIN7Q9H840 131 aaKnown RBP15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PPIAL4AQ9Y536 164 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 NTN1O95631 604 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 DCAF10Q5QP82 559 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 TMSB15BA0A087X1C1 80 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 ARL14EPLP0DKL9 152 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 PEBP1P30086 187 aaKnown RBP15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 TMEM56-RWDD3S4R434 201 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 LINC00869P0C866 280 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 SHISA5Q8N114 240 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 DDA1Q9BW61 102 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 RBKSQ9H477 322 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 KLHDC2Q9Y2U9 406 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 UCP2P55851 309 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM209BQ5JX69 171 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 ALKBH7Q9BT30 221 aaPredicted RBP15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 WDR90Q96KV7 1748 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 A0A1W2PRD5 423 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 A0A1W2PRF3 423 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 A0A1W2PRM7 423 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 TRGC2P03986 189 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 FCARP24071 287 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 REG1BP48304 166 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 SOSTQ9BQB4 213 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 HCFC1P51610 2035 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 F12P00748 615 aaPredicted RBP15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 SMUG1Q53HV7 270 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 ARL6IP6Q8N6S5 226 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 OR4C13Q8NGP0 309 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM216AQ8WUB2 273 aa15.1■□□□□ 0.01
NOTCH3-201ENST00000263388 DLL1O00548 723 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 MGST3O14880 152 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 TTTY12Q9BZ98 90 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 R4GN57 208 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 B4E171 279 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 TSPAN7P41732 249 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 PSG9Q00887 426 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 SRSF5Q13243 272 aaKnown RBP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 SMRP1Q8NCR6 262 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 PCGF1Q9BSM1 259 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 RPS11P62280 158 aaKnown RBP eCLIP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 MRPL18Q9H0U6 180 aaKnown RBP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 WISP3O95389 354 aaPredicted RBP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 CCL4P13236 92 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 FBLIM1Q8WUP2 373 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 YBX2Q9Y2T7 364 aaKnown RBP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 PCP4P48539 62 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 TIMP4Q99727 224 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 LOXL3P58215 753 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 C2orf88Q9BSF0 95 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 WNT5BQ9H1J7 359 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM181BA6NEQ2 426 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 CD160O95971 181 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 KIR2DL4Q99706 377 aa15.09■□□□□ 0.01
NOTCH3-201ENST00000263388 IFI6P09912 130 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 RPL27AP46776 148 aaKnown RBP15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 OR51M1Q9H341 326 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 NMBP08949 121 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 NUBP1P53384 320 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 ZNF506Q5JVG8 444 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 KCNE5Q9UJ90 142 aa15.08■□□□□ 0.01
NOTCH3-201ENST00000263388 SLC25A17O43808 307 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 SAXO1Q8IYX7 474 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 SPINT1O43278 529 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 DCAF12L2Q5VW00 463 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 TRBV5-5A0A0J9YX44 114 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 AGAP20933 346 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 KRTCAP3Q53RY4 240 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 CLEC2AQ6UVW9 174 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 CISD1Q9NZ45 108 aaKnown RBP15.08■□□□□ 0
NOTCH3-201ENST00000263388 FAM209AQ5JX71 171 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 TEX29Q8N6K0 151 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 QTRT1Q9BXR0 403 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms