RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 VDAC1P21796 283 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
VMP1-201ENST00000262291 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 HSD17B11Q8NBQ5 300 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 Q8WTZ3 238 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 NINJ1Q92982 152 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 SH3BGRL3Q9H299 93 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
VMP1-201ENST00000262291 ABCA4P78363 2273 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 DYSFO75923 2080 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 NPIPB11E5RHQ5 1161 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 CHST1O43916 411 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 PACRGQ96M98 296 aaPredicted RBP11.3□□□□□ -0.6
VMP1-201ENST00000262291 CCL13Q99616 98 aa11.3□□□□□ -0.6
VMP1-201ENST00000262291 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
VMP1-201ENST00000262291 CYB5BO43169 146 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 IAPPP10997 89 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 MZT1Q08AG7 82 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 RHEBQ15382 184 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 RARRES2Q99969 163 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 DOCK11Q5JSL3 2073 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 RAI1Q7Z5J4 1906 aaPredicted RBP11.29□□□□□ -0.6
VMP1-201ENST00000262291 ODAMA1E959 279 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 GPR137BO60478 399 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 VAMP2P63027 116 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
VMP1-201ENST00000262291 FAM90A1Q86YD7 464 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 SIRT7Q9NRC8 400 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 IFNL4K9M1U5 179 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 KRASP01116 189 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 IFNA10P01566 189 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
VMP1-201ENST00000262291 CDSNQ15517 529 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 GNG12Q9UBI6 72 aa11.29□□□□□ -0.6
VMP1-201ENST00000262291 C17orf98A8MV24 154 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 A8MWP6 167 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 PRH1P02810 166 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 MDKP21741 143 aaPredicted RBP11.28□□□□□ -0.6
VMP1-201ENST00000262291 G6PCP35575 357 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 RBPJQ06330 500 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
VMP1-201ENST00000262291 SPIN2AQ99865 258 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 SPIN2BQ9BPZ2 258 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
VMP1-201ENST00000262291 LHBP01229 141 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 P2RY1P47900 373 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
VMP1-201ENST00000262291 JKAMPQ9P055 326 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
VMP1-201ENST00000262291 PLAUP00749 431 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 CAMLGP49069 296 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 RPS16P62249 146 aaKnown RBP11.27□□□□□ -0.61
VMP1-201ENST00000262291 LY6DQ14210 128 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SPINK9Q5DT21 86 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SOHLH1Q5JUK2 328 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 ZNF645Q8N7E2 425 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SNX22Q96L94 193 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 LINC00473A8K010 186 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 TAAR5O14804 337 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SPINT2O43291 252 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 S1PR2O95136 353 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 TRGC1P0CF51 173 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 TAGLN2P37802 199 aaKnown RBP11.27□□□□□ -0.61
VMP1-201ENST00000262291 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 ELOBQ15370 118 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 C3orf36Q3SXR2 165 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 C11orf1Q9H5F2 150 aa11.27□□□□□ -0.61
VMP1-201ENST00000262291 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 K7N7A8 449 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 CCL21O00585 134 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 PAX9P55771 341 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 RAB4BP61018 213 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 ID3Q02535 119 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 RPL39P5Q59GN2 51 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 FRZBQ92765 325 aa11.26□□□□□ -0.61
VMP1-201ENST00000262291 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms