RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 INO80EQ8NBZ0 244 aaPredicted RBP10.78□□□□□ -0.68
SGCA-201ENST00000262018 OR8B3Q8NGG8 313 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 LRRC20Q8TCA0 184 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 SSMEM1Q8WWF3 244 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 CORO2AQ92828 525 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 C2orf50Q96LR7 162 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 OR8B2Q96RD0 313 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 TP53RKQ96S44 253 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 PARP12Q9H0J9 701 aaKnown RBP10.78□□□□□ -0.68
SGCA-201ENST00000262018 METTL8Q9H825 291 aaKnown RBP10.78□□□□□ -0.68
SGCA-201ENST00000262018 RAB9BQ9NP90 201 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
SGCA-201ENST00000262018 C13orf42A0A1B0GVH6 325 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 ADAM20O43506 726 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 TSC22D2O75157 780 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 HOXB5P09067 269 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 NUP62P37198 522 aaPredicted RBP10.77□□□□□ -0.68
SGCA-201ENST00000262018 PAX2Q02962 417 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 GNMTQ14749 295 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 GPR157Q5UAW9 335 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 LYPD2Q6UXB3 125 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 Q6ZSV7 163 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 ACOT7LQ6ZUV0 252 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 ZBTB34Q8NCN2 500 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 TMEM56Q96MV1 263 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 OR2S2Q9NQN1 319 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 CALYQ9NYX4 217 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 JPT1Q9UK76 154 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 TMEM56-RWDD3S4R434 201 aa10.77□□□□□ -0.68
SGCA-201ENST00000262018 EPPK1P58107 5090 aaKnown RBP10.77□□□□□ -0.69
SGCA-201ENST00000262018 DOCK11Q5JSL3 2073 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 FXYD6-FXYD2A0A087WZ82 144 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 TRGV10A0A0A0MS01 117 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 IGHV2-70DA0A0C4DH43 119 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 KANTRA0A1W2PQU2 76 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 H0Y980 276 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 ARPC5O15511 151 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 IFNA21P01568 189 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 OR8U9P0C7N5 309 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 F2RP25116 425 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 UCP1P25874 307 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 PSMB6P28072 239 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 EIF5AP63241 154 aaKnown RBP10.76□□□□□ -0.69
SGCA-201ENST00000262018 IL15RAQ13261 267 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 C17orf58Q2M2W7 97 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 GGNBP1Q5YKI7 109 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 TMUB2Q71RG4 321 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 KCNRGQ8N5I3 272 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 ZNF645Q8N7E2 425 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 OR8U1Q8NH10 309 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 SCARB1Q8WTV0 552 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 PPP1R1CQ8WVI7 109 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 OR10C1Q96KK4 312 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 SSBP3Q9BWW4 388 aaPredicted RBP10.76□□□□□ -0.69
SGCA-201ENST00000262018 ARL6Q9H0F7 186 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 LINC00574Q9H8X3 128 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 SLC25A10Q9UBX3 287 aaPredicted RBP10.76□□□□□ -0.69
SGCA-201ENST00000262018 TNFSF18Q9UNG2 199 aa10.76□□□□□ -0.69
SGCA-201ENST00000262018 UBE2J1Q9Y385 318 aaPredicted RBP10.76□□□□□ -0.69
SGCA-201ENST00000262018 RBM7Q9Y580 266 aaKnown RBP10.76□□□□□ -0.69
SGCA-201ENST00000262018 KBTBD11-OT1A0A1B0GTJ5 212 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 DUXBA0A1W2PPF3 345 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 ZNF729A6NN14 1252 aaPredicted RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 YPEL1O60688 119 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 PPP1CCP36873 323 aaKnown RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 GNB2P62879 340 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 MEF2CQ06413 473 aaPredicted RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 EXOSC2Q13868 293 aaKnown RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 TMEM30BQ3MIR4 351 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 FAM53AQ6NSI3 398 aaPredicted RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 DRAM1Q8N682 238 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 LHFPL5Q8TAF8 219 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 IL22RA2Q969J5 263 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 YPEL2Q96QA6 119 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 CTSZQ9UBR2 303 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 CLN8Q9UBY8 286 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 IGHV3-43A0A0B4J1X8 118 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 hADV38S2A0JD32 116 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 ITGB1BP1O14713 200 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 FCN3O75636 299 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 MPC2O95563 127 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 CDS2O95674 445 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 IGHV3-43DP0DP04 118 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 LYL1P12980 280 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 NDUFB7P17568 137 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 CXCL2P19875 107 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 BPIFB3P59826 476 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 EIF4EBP1Q13541 118 aaPredicted RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 MORN2Q502X0 79 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 ZNF841Q6ZN19 808 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 LYZL2Q7Z4W2 148 aa10.75□□□□□ -0.69
SGCA-201ENST00000262018 SELENOHQ8IZQ5 122 aaKnown RBP10.75□□□□□ -0.69
SGCA-201ENST00000262018 SLC7A5P1Q8MH63 180 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms