RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ABHD12Q8N2K0 398 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 OR2Y1Q8NGV0 311 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 TRAV3A0A0B4J244 114 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 LINC00473A8K010 186 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 IFNA1P01562 189 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 NBL1P41271 181 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 CNN1P51911 297 aaKnown RBP10.89□□□□□ -0.67
SNX1-201ENST00000261889 MDP1Q86V88 176 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 ZNF709Q8N972 641 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 SCCPDHQ8NBX0 429 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 DTD1Q8TEA8 209 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 IL36GQ9NZH8 169 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 SELENOKQ9Y6D0 94 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
SNX1-201ENST00000261889 RAB4BP61018 213 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 NUTF2P61970 127 aaKnown RBP10.89□□□□□ -0.67
SNX1-201ENST00000261889 PPP1R32Q7Z5V6 425 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 QTRT1Q9BXR0 403 aaKnown RBP10.89□□□□□ -0.67
SNX1-201ENST00000261889 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
SNX1-201ENST00000261889 IGHV3-48P01763 117 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 IRF2P14316 349 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 BRWD1-AS2P59051 145 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 PLGLB1Q02325 96 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 MOB3BQ86TA1 216 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 OR10P1Q8NGE3 313 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 MAP1AP78559 2803 aaPredicted RBP10.88□□□□□ -0.67
SNX1-201ENST00000261889 GJE1A6NN92 205 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 B4DEV8 164 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 RRHO14718 337 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 FOXH1O75593 365 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 ZDHHC11Q9H8X9 412 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 OBP2BQ9NPH6 170 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 DYSFO75923 2080 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 PTPRZ1P23471 2315 aaPredicted RBP10.88□□□□□ -0.67
SNX1-201ENST00000261889 INTS1Q8N201 2190 aaKnown RBP10.88□□□□□ -0.67
SNX1-201ENST00000261889 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 LRBAP50851 2863 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 CA1P00915 261 aaPredicted RBP10.88□□□□□ -0.67
SNX1-201ENST00000261889 IGHEP01854 428 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 ARL14EPLP0DKL9 152 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 KRTDAPP60985 99 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 PLP2Q04941 152 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 TRIM61Q5EBN2 209 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 Q6ZSR3 168 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 APOBEC3DQ96AK3 386 aaPredicted RBP10.88□□□□□ -0.67
SNX1-201ENST00000261889 APH1AQ96BI3 265 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 OR6C3Q9NZP0 311 aa10.88□□□□□ -0.67
SNX1-201ENST00000261889 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
SNX1-201ENST00000261889 FABP6P51161 128 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 ABLIM2Q6H8Q1 611 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 DIRC2Q96SL1 478 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 CD82P27701 267 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 IER3P46695 156 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 GNG3P63215 75 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 LINC01551Q86U37 167 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 NEIL1Q96FI4 390 aaPredicted RBP10.87□□□□□ -0.67
SNX1-201ENST00000261889 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 SGK494Q96LW2 274 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 SF3B5Q9BWJ5 86 aaKnown RBP10.87□□□□□ -0.67
SNX1-201ENST00000261889 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 ZZEF1O43149 2961 aa10.87□□□□□ -0.67
SNX1-201ENST00000261889 FCGR3BO75015 233 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 TMEM170AQ8WVE7 144 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 LOXL2Q9Y4K0 774 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 SERF1AO75920 110 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 PMCHP20382 165 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 SPCS3P61009 180 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 ARG2P78540 354 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 Q6ZWC4 215 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 ST6GALNAC3Q8NDV1 305 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 OR8G5Q8NG78 346 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 C2orf88Q9BSF0 95 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 NAGKQ9UJ70 344 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 TCFL5Q9UL49 500 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 AKAP6Q13023 2319 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 IGHV3OR15-7A0A075B7D8 119 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 SH2D1BO14796 132 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 PPP1CBP62140 327 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 RPL39P5Q59GN2 51 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 Q6P435 159 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 PINX1Q96BK5 328 aaKnown RBP10.86□□□□□ -0.67
SNX1-201ENST00000261889 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
SNX1-201ENST00000261889 SH2D2AQ9NP31 389 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 TUBG2Q9NRH3 451 aa10.86□□□□□ -0.67
SNX1-201ENST00000261889 TRAV1-1A0A0B4J248 108 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 HBZP02008 142 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms