RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ZNF407Q9C0G0 2248 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 SPTY2D1-AS1A0A0U1RR47 76 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 hCG_38984A0A1B0GV85 526 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 EPOPA6NHQ4 379 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 HSBP1L1C9JCN9 74 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 CA2P00918 260 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 PATE4P0C8F1 98 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 ARL4DP49703 201 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 RHOGP84095 191 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 PSG7Q13046 419 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 GCSAMLQ5JQS6 135 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-201ENST00000261443 FAM27BQ5VT28 67 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 OR4A47Q6IF82 309 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 PRR27Q6MZM9 219 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 NIT1Q86X76 327 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 FAM58AQ8N1B3 248 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 FGFRL1Q8N441 504 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 ST6GALNAC3Q8NDV1 305 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 OR56B2PQ8NGI1 322 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 BCL2L2Q92843 193 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-201ENST00000261443 LIN7CQ9NUP9 197 aaKnown RBP6.09□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF891A8MT65 544 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-201ENST00000261443 K7EN84 100 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 RPS20P60866 119 aaKnown RBP6.09□□□□□ -1.43
CSDE1-201ENST00000261443 FGF12P61328 243 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 FAM69BQ5VUD6 431 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 RAET1LQ5VY80 246 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 C20orf204Q6ZNR8 217 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 MUC15Q8N387 334 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 OR4F17Q8NGA8 305 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 OR10G3Q8NGC4 313 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 OR1A1Q9P1Q5 309 aa6.09□□□□□ -1.43
CSDE1-201ENST00000261443 TRAV9-2A0A087WT02 112 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 K7ERU9 68 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 MT-ND6P03923 174 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 REG1AP05451 166 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 EDDM3BP56851 147 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 LRRC10Q5BKY1 277 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 WDR73Q6P4I2 378 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 VASH2Q86V25 355 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 OR5A2Q8NGI9 324 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 LMX1AQ8TE12 382 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 LRRC61Q9BV99 259 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 CLEC7AQ9BXN2 247 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 MRPL27Q9P0M9 148 aaKnown RBP6.08□□□□□ -1.44
CSDE1-201ENST00000261443 CD207Q9UJ71 328 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF391Q9UJN7 358 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 UNC13CQ8NB66 2214 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 TOX4O94842 621 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 IGLV2-14P01704 120 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 CA3P07451 260 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 SRIP30626 198 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 PTGDSP41222 190 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 TRIP6Q15654 476 aaKnown RBP6.08□□□□□ -1.44
CSDE1-201ENST00000261443 DCAF12Q5T6F0 453 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 Q8NFD4 153 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 OR1L3Q8NH93 324 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 TSKUQ8WUA8 353 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 SMIM12Q96EX1 92 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 UCN2Q96RP3 112 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 TXNDC17Q9BRA2 123 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 PMS2P5A8MQ11 134 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 C10orf142B7Z368 130 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 TRAPPC2LH3BP13 241 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 ARL14EPLP0DKL9 152 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF32P17041 273 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 RELBQ01201 579 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 HYAL1Q12794 435 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 HLA-BQ31612 363 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 CLEC1BQ9P126 229 aa6.08□□□□□ -1.44
CSDE1-201ENST00000261443 ODAMA1E959 279 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ZG16O60844 167 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 IGLL1P15814 213 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 SRD5A2P31213 254 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 FASLGP48023 281 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 GPM6AP51674 278 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 SLC35B1P78383 322 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ARF1P84077 181 aaKnown RBP6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TMEM249Q2WGJ8 235 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 Q56UQ5 140 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TMEM136Q6ZRR5 245 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 RAB1CQ92928 201 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 IL19Q9UHD0 177 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ASXL3Q9C0F0 2248 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ZFHX4Q86UP3 3567 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 IGLV3-32A0A0A0MS00 114 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 OR2T8A6NH00 312 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 G6PCP35575 357 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 RPL31P62899 125 aaKnown RBP6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ARG2P78540 354 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TGFBR3Q03167 851 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 MPV17L2Q567V2 206 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TRIM61Q5EBN2 209 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 AMMECR1LQ6DCA0 310 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 MKXQ8IYA7 352 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF439Q8NDP4 499 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 OR2M7Q8NG81 312 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 OR4P4Q8NGL7 312 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms