RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
GYPC-201ENST00000259254 GALNT14Q96FL9 552 aa12.59□□□□□ -0.39
GYPC-201ENST00000259254 SNRPGP15A8MWD9 76 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 H0YJW9 148 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
GYPC-201ENST00000259254 FBP1P09467 338 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 RRASP10301 218 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 RAB13P51153 203 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 SRPXP78539 464 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
GYPC-201ENST00000259254 TMEM187Q14656 261 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 ANKRD55Q3KP44 614 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 LGI3Q8N145 548 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.4
GYPC-201ENST00000259254 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 C22orf15Q8WYQ4 148 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 DDB2Q92466 427 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 PHB2Q99623 299 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 TMEM222Q9H0R3 208 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
GYPC-201ENST00000259254 SOX21Q9Y651 276 aaPredicted RBP12.58□□□□□ -0.4
GYPC-201ENST00000259254 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
GYPC-201ENST00000259254 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 RAMP3O60896 148 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 CRYZL1O95825 349 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 UCP1P25874 307 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 BRS3P32247 399 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 PDPNQ86YL7 162 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
GYPC-201ENST00000259254 GLYATL2Q8WU03 294 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 AJUBAQ96IF1 538 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
GYPC-201ENST00000259254 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
GYPC-201ENST00000259254 S1PR2O95136 353 aa12.56□□□□□ -0.4
GYPC-201ENST00000259254 HES1Q14469 280 aa12.56□□□□□ -0.4
GYPC-201ENST00000259254 DHRS7BQ6IAN0 325 aaPredicted RBP12.56□□□□□ -0.4
GYPC-201ENST00000259254 BCL6BQ8N143 479 aaPredicted RBP12.56□□□□□ -0.4
GYPC-201ENST00000259254 MITD1Q8WV92 249 aa12.56□□□□□ -0.4
GYPC-201ENST00000259254 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
GYPC-201ENST00000259254 MDFIC2A0A1B0GVS7 189 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 SHOXO15266 292 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 ATG12O94817 140 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 HPRT1P00492 218 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 IGKV1D-33P01593 117 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 IGKV1-33P01594 117 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 SNRNP70P08621 437 aaKnown RBP12.55□□□□□ -0.4
GYPC-201ENST00000259254 RPA2P15927 270 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 CD24P25063 80 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 CD1BP29016 333 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 AKR1C2P52895 323 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 BRWD1-AS2P59051 145 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
GYPC-201ENST00000259254 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
GYPC-201ENST00000259254 CFHR4Q92496 578 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
GYPC-201ENST00000259254 MED28Q9H204 178 aa12.55□□□□□ -0.4
GYPC-201ENST00000259254 FAM212BQ9NTI7 297 aaPredicted RBP12.55□□□□□ -0.4
GYPC-201ENST00000259254 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 VENTXO95231 258 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 CDS2O95674 445 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 HOXB5P09067 269 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 FAM106CPP0CH98 169 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 ERVK-16P61578 105 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 HNF4GQ14541 408 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 SLC35G3Q8N808 338 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 RBPMSQ93062 196 aaKnown RBP12.54□□□□□ -0.4
GYPC-201ENST00000259254 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 R3HDM4Q96D70 268 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 PLEKHA2Q9HB19 425 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
GYPC-201ENST00000259254 GOSR2O14653 212 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 MOSP00540 346 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 HRASP01112 189 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 KRASP01116 189 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 IFNA21P01568 189 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 NQO2P16083 231 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 TMEM177Q53S58 311 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 SSX9Q7RTT3 188 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 DMBX1Q8NFW5 382 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms