RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PRR30Q53SZ7 412 aaPredicted RBP6.53□□□□□ -1.36
GPNMB-201ENST00000258733 TMEM196Q5HYL7 178 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 COX20Q5RI15 118 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 CLDN19Q8N6F1 224 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 NPWQ8N729 165 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 OR6K6Q8NGW6 343 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 LINC01587Q99440 93 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 SLC2A6Q9UGQ3 507 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 IER3IP1Q9Y5U9 82 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 PDE4DIPQ5VU43 2346 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 A0A1W2PP11 408 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 KLF7O75840 302 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 CXorf1O96002 111 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 CA2P00918 260 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 PRSS3P35030 304 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 TNFAIP6P98066 277 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF85Q03923 595 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 MALLQ13021 153 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ELOCQ15369 112 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 GAGE2EQ4V326 116 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ASTLQ6HA08 431 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 FAM166AQ6J272 317 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 TRIM40Q6P9F5 258 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 RYBPQ8N488 228 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF670Q9BS34 389 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 CLEC7AQ9BXN2 247 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 GAGE2DQ9UEU5 116 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 CD207Q9UJ71 328 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 KCNS2Q9ULS6 477 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 VWA8A3KMH1 1905 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ARID1AO14497 2285 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 M0QYG6 137 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 NDUFS4O43181 175 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 EDNRAP25101 427 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 HLA-DRB5Q30154 266 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 TCF19Q9Y242 345 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 DOCK4Q8N1I0 1966 aa6.52□□□□□ -1.37
GPNMB-201ENST00000258733 ARID1BQ8NFD5 2236 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-201ENST00000258733 F2Z2F3 143 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 NEURL1O76050 574 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 OR2H2O95918 312 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 FOXI1Q12951 378 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SP5Q6BEB4 398 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM219Q86XT9 240 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM229BQ8NBD8 167 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 STAG3L4Q8TBR4 150 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 RASL10AQ92737 203 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 PGLYRP3Q96LB9 341 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 C2orf50Q96LR7 162 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SIGLEC8Q9NYZ4 499 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 KIAA2026Q5HYC2 2103 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 PHF1O43189 567 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-201ENST00000258733 B3GALT4O96024 378 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TNFP01375 233 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 CAMPP49913 170 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 FHL3Q13643 280 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 Q499Y3 187 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SAMD5Q5TGI4 173 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TXNDC8Q6A555 127 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 CDC42EP5Q6NZY7 148 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM207Q6UWW9 146 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 CYP2G1PQ6ZSU1 146 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SGPP2Q8IWX5 399 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM86BQ8N661 226 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 KCNS1Q96KK3 526 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SMCHD1A6NHR9 2005 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 SAA2-SAA4A0A096LPE2 208 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 C2CD4BA6NLJ0 364 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 CDC42EP2O14613 210 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 CHST1O43916 411 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 HSBP1O75506 76 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 ATP5LO75964 103 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 HBE1P02100 147 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 APOA2P02652 100 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 MTCP1P56278 107 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 ADORA2A-AS1P86434 159 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 RTP5Q14D33 572 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 STPG1Q5TH74 334 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 ACP7Q6ZNF0 438 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 LILRA3Q8N6C8 439 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-201ENST00000258733 TPRX1Q8N7U7 411 aa6.51□□□□□ -1.37
GPNMB-201ENST00000258733 MRPL30Q8TCC3 161 aaKnown RBP6.51□□□□□ -1.37
GPNMB-201ENST00000258733 DOCK9Q9BZ29 2069 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF324O75467 553 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 WISP3O95389 354 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 PRSS56P0CW18 603 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF708P17019 499 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 TIAL1Q01085 375 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms