RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FRZBQ92765 325 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 Q9UFV3 132 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 TNCP24821 2201 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 VDAC1P21796 283 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 GNG10P50151 68 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 UCP3P55916 312 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 ERVK11-1P61568 191 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 PPP1R2P9O14990 202 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 GFRA3O60609 400 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 CDS2O95674 445 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 CCL13Q99616 98 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 PRDM13Q9H4Q3 707 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 GYPAP02724 150 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 CD55P08174 381 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 RPL30P62888 115 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 ICAM4Q14773 271 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 CCL17Q92583 94 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 C14orf144Q96I85 54 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 SPIN2AQ99865 258 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 SPIN2BQ9BPZ2 258 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 WIPI2Q9Y4P8 454 aa12.24□□□□□ -0.45
TRAFD1-201ENST00000257604 CLDN1O95832 211 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 NEUROG1Q92886 237 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 HINT2Q9BX68 163 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 PLEKHF2Q9H8W4 249 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 WASF3Q9UPY6 502 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNF146Q15072 292 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 OR4D5Q8NGN0 318 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNF665Q9H7R5 613 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNRD1Q9P1U0 126 aa12.23□□□□□ -0.45
TRAFD1-201ENST00000257604 A8MXE2 369 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 DEFA4P12838 97 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 LMO1P25800 156 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 TIMM23BQ5SRD1 257 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM57AQ8TBR7 257 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 CSMD1Q96PZ7 3565 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNF266Q14584 549 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 GCSAMQ8N6F7 178 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 CENPEQ02224 2701 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 C17orf98A8MV24 154 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 IGKV1-39P01597 117 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 IGKV1D-39P04432 117 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 TBR1Q16650 682 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 RPL39P5Q59GN2 51 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 IGFL3Q6UXB1 125 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM216BQ8N7L0 139 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 KDF1Q8NAX2 398 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 GAB2Q9UQC2 676 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
TRAFD1-201ENST00000257604 DCHS2Q6V1P9 2916 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 IGKV1D-17A0A075B6S4 117 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 OPN1MWP04001 364 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 UCP1P25874 307 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 CD40P25942 277 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 SRPXP78539 464 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 TVP23CQ96ET8 276 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 CLN8Q9UBY8 286 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 HIVEP3Q5T1R4 2406 aa12.21□□□□□ -0.45
TRAFD1-201ENST00000257604 PLXNB1O43157 2135 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 C16orf97H3BN30 126 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 SPINT2O43291 252 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 FCGR3BO75015 233 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 S1PR2O95136 353 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 NUBP1P53384 320 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 BSPH1Q075Z2 132 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 PRSS8Q16651 343 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 LINC00596Q86U02 117 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 Q8NA96 180 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 C1orf162Q8NEQ5 155 aaPredicted RBP12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 DSCAMO60469 2012 aa12.21□□□□□ -0.46
TRAFD1-201ENST00000257604 A0A087X0M5 115 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 A0A1B0GX30 115 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 H0Y980 276 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 IGLV1-44P01699 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms