RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 DEFB113Q30KQ7 82 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 ORAI1Q96D31 301 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 CD1BP29016 333 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 MAGEB1P43366 347 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 CLEC18BQ6UXF7 455 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 WDR82Q6UXN9 313 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 PXMP4Q9Y6I8 212 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 MFSD2BA6NFX1 497 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 NPFFO15130 113 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 ASPHD2Q6ICH7 369 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 Q96MF0 132 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 FOXF2Q12947 444 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 GUK1Q16774 197 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 SP6Q3SY56 376 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 SPSB3Q6PJ21 355 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 H7C1H1 209 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 CD55P08174 381 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 ANOS1P23352 680 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 CTF1Q16619 201 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
PRPF38A-201ENST00000257181 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 UBE2L6O14933 153 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 IGKV3-15P01624 115 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 PNRC1Q12796 327 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 FAM223AQ8IWN6 122 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 C21orf62Q9NYP8 219 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 WSB1Q9Y6I7 421 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 CST7O76096 145 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 ERVFC1-1P60608 527 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 TMPRSS13Q9BYE2 586 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 GCM2O75603 506 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 TEX38Q6PEX7 206 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 RGS13O14921 159 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 CLPSP04118 112 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 UBE2V2Q15819 145 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 ADAM11O75078 769 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 PPP1R17O96001 155 aa11.29□□□□□ -0.6
PRPF38A-201ENST00000257181 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 OR10J1P30954 320 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 VMO1Q7Z5L0 202 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 SAT2Q96F10 170 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 MARCH11A6NNE9 402 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 SIX6O95475 246 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 P01737 135 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 NXF2Q9GZY0 626 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 GATA4P43694 442 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
PRPF38A-201ENST00000257181 A0A1W2PPE3 182 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 MPC2O95563 127 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 OR9G9P0C7N8 305 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 TOR2AQ5JU69 321 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.6
PRPF38A-201ENST00000257181 ATG2BQ96BY7 2078 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 UBE2E1P51965 193 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 HERVK_113P61574 105 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 ITGB1BP1O14713 200 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 HKR1P10072 659 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 CRISP2P16562 243 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 GBGT1Q8N5D6 347 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 IFT22Q9H7X7 185 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 TNFSF18Q9UNG2 199 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.61
PRPF38A-201ENST00000257181 TBX6O95947 436 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms