RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 H0YIG0 161 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 XRCC2O43543 280 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 CLEC3AO75596 197 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 ZIC2O95409 532 aaPredicted RBP10.04□□□□□ -0.8
CCNA1-201ENST00000255465 SMIM10L1P0DMW3 83 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 VSIG8P0DPA2 414 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 TBR1Q16650 682 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 SLC25A34Q6PIV7 304 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 MBD6Q96DN6 1003 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 SLC35A4Q96G79 324 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 SMIM10Q96HG1 83 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GPR82Q96P67 336 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 COMMD5Q9GZQ3 224 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 AICDAQ9GZX7 198 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 WDR54Q9H977 334 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GP6Q9HCN6 339 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 DOCK10Q96BY6 2186 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 PCSK5Q92824 1860 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 IGLV3-12A0A075B6K2 115 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GRIFINA4D1Z8 144 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 SH2D1BO14796 132 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 DEGS1O15121 323 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 FOLR3P41439 243 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GFRA1P56159 465 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 RPS4XP62701 263 aaKnown RBP10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GAGE5Q13069 117 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 GAGE6Q13070 117 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 DEFB134Q4QY38 66 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 KCTD18Q6PI47 426 aaPredicted RBP10.04□□□□□ -0.8
CCNA1-201ENST00000255465 OR5C1Q8NGR4 320 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 OTOSQ8NHW6 89 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 KCNG3Q8TAE7 436 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 NEIL1Q96FI4 390 aaPredicted RBP10.04□□□□□ -0.8
CCNA1-201ENST00000255465 VN1R1Q9GZP7 353 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 BOKQ9UMX3 212 aaPredicted RBP10.04□□□□□ -0.8
CCNA1-201ENST00000255465 FAM24AA6NFZ4 105 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 C4orf51C9J302 202 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 F2RL2O00254 374 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 RAB29O14966 203 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 CA2P00918 260 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 AESQ08117 197 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 ZP4Q12836 540 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 IGFBP7Q16270 282 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 SHISA6Q6ZSJ9 500 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 SHISA5Q8N114 240 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 TMEM171Q8WVE6 324 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 MS4A6AQ9H2W1 248 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 CENPMQ9NSP4 180 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 NXT1Q9UKK6 140 aaKnown RBP10.03□□□□□ -0.8
CCNA1-201ENST00000255465 PSG8Q9UQ74 426 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
CCNA1-201ENST00000255465 NBEAQ8NFP9 2946 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.8
CCNA1-201ENST00000255465 MUC21A0A0G2JKD1 596 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 MUC21A0A140T8X8 626 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 A0A1B0GW15 77 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 C7orf71A4D174 169 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 IGLL1P15814 213 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.8
CCNA1-201ENST00000255465 DYNLT3P51808 116 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 ADIPOQQ15848 244 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 DEFB109BQ30KR1 87 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 MUC21Q5SSG8 566 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 MRPL2Q5T653 305 aaKnown RBP10.02□□□□□ -0.8
CCNA1-201ENST00000255465 MFSD12Q6NUT3 480 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 CBLN3Q6UW01 205 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF562Q6V9R5 426 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 SCGB1C1Q8TD33 95 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 GALMQ96C23 342 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 HARBI1Q96MB7 349 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 ELOVL3Q9HB03 270 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 RPRMQ9NS64 109 aa10.02□□□□□ -0.8
CCNA1-201ENST00000255465 A0A1B0GTH9 108 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 A0A1W2PS18 150 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 ERI3O43414 337 aaKnown RBP10.02□□□□□ -0.81
CCNA1-201ENST00000255465 IGHG4P01861 327 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 PF4V1P10720 104 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 NPY1RP25929 384 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 CRYBB3P26998 211 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 OTX2P32243 289 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 SNU13P55769 128 aaKnown RBP10.02□□□□□ -0.81
CCNA1-201ENST00000255465 SRSF7Q16629 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCNA1-201ENST00000255465 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
CCNA1-201ENST00000255465 TSSK2Q96PF2 358 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 SDF2Q99470 211 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 IL36GQ9NZH8 169 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 TIMM9Q9Y5J7 89 aa10.02□□□□□ -0.81
CCNA1-201ENST00000255465 ATMQ13315 3056 aa10.01□□□□□ -0.81
CCNA1-201ENST00000255465 RENP00797 406 aa10.01□□□□□ -0.81
CCNA1-201ENST00000255465 IFI6P09912 130 aa10.01□□□□□ -0.81
CCNA1-201ENST00000255465 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
CCNA1-201ENST00000255465 MLF1P58340 268 aa10.01□□□□□ -0.81
CCNA1-201ENST00000255465 POU3F1Q03052 451 aaPredicted RBP10.01□□□□□ -0.81
CCNA1-201ENST00000255465 TMEM177Q53S58 311 aa10.01□□□□□ -0.81
CCNA1-201ENST00000255465 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms