RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 M0R1X1 148 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 NKX2-1P43699 371 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 EWSR1Q01844 656 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 NCR3LG1Q68D85 454 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 SPIN2AQ99865 258 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 SPIN2BQ9BPZ2 258 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 SPTAN1Q13813 2472 aaKnown RBP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 DUTP33316 252 aaKnown RBP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 NPBWR1P48145 328 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 F2RL1P55085 397 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 ZNF66Q6ZN08 573 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 LYG1Q8N1E2 194 aa15.51■□□□□ 0.07
TRIM47-201ENST00000254816 RBMXL1Q96E39 390 aaKnown RBP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 FAM212BQ9NTI7 297 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-201ENST00000254816 AKAP6Q13023 2319 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 SAA2-SAA4A0A096LPE2 208 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 IGSF23A1L1A6 192 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 S1PR2O95136 353 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 SFTA3P0C7M3 94 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 SAA2P0DJI9 122 aaPredicted RBP15.5■□□□□ 0.07
TRIM47-201ENST00000254816 ZNF616Q08AN1 781 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 CLINT1Q14677 625 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 ODF3L1Q8IXM7 274 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 HSD17B10Q99714 261 aaKnown RBP15.5■□□□□ 0.07
TRIM47-201ENST00000254816 GINS3Q9BRX5 216 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 C11orf1Q9H5F2 150 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 RFNGQ9Y644 331 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 ARHGAP32A7KAX9 2087 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 MYO18BQ8IUG5 2567 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 DOPEY1Q5JWR5 2465 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 MALRD1Q5VYJ5 2156 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 CLEC18AA5D8T8 446 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 TOR1AO14656 332 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 G6PCP35575 357 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 RAB7AP51149 207 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 HEPN1Q6WQI6 88 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 OR2C3Q8N628 320 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 CLEC18CQ8NCF0 446 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 CLRN3Q8NCR9 226 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 SEC11CQ9BY50 192 aa15.5■□□□□ 0.07
TRIM47-201ENST00000254816 KRASP01116 189 aa15.49■□□□□ 0.07
TRIM47-201ENST00000254816 SPP1P10451 314 aa15.49■□□□□ 0.07
TRIM47-201ENST00000254816 MIDNQ504T8 468 aa15.49■□□□□ 0.07
TRIM47-201ENST00000254816 CACNG5Q9UF02 275 aa15.49■□□□□ 0.07
TRIM47-201ENST00000254816 ITGB1BP1O14713 200 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 FSTL3O95633 263 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 RAB1CQ92928 201 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 LSM10Q969L4 123 aaKnown RBP15.48■□□□□ 0.07
TRIM47-201ENST00000254816 TIMD4Q96H15 378 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 FCGR3BO75015 233 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 SEC11BP0C7V7 166 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 DLX6P56179 175 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 MRPS11P82912 194 aaKnown RBP15.48■□□□□ 0.07
TRIM47-201ENST00000254816 SRSF1Q07955 248 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRIM47-201ENST00000254816 TMEM155Q4W5P6 130 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 CHODLQ9H9P2 273 aa15.48■□□□□ 0.07
TRIM47-201ENST00000254816 A0A1B0GV50 99 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 TSPAN15O95858 294 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 CD5P06127 495 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 CAMLGP49069 296 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 DLX1P56177 255 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 TMEM182Q6ZP80 229 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-201ENST00000254816 SLC25A48Q6ZT89 311 aaKnown RBP15.47■□□□□ 0.07
TRIM47-201ENST00000254816 ZNF251Q9BRH9 671 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 A0A1B0GU03 582 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 RAB29O14966 203 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 PITX3O75364 302 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 TMEM50AO95807 157 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 PRH1P02810 166 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 PRB3Q04118 309 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-201ENST00000254816 OR10A7Q8NGE5 316 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 OR8B3Q8NGG8 313 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 FAM216AQ8WUB2 273 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 OR8B2Q96RD0 313 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 TACC2O95359 2948 aa15.47■□□□□ 0.07
TRIM47-201ENST00000254816 SNAPINO95295 136 aa15.46■□□□□ 0.07
TRIM47-201ENST00000254816 PVALBP20472 110 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-201ENST00000254816 VAMP2P63027 116 aa15.46■□□□□ 0.07
TRIM47-201ENST00000254816 TMEM30BQ3MIR4 351 aa15.46■□□□□ 0.07
TRIM47-201ENST00000254816 LYPD6BQ8NI32 183 aa15.46■□□□□ 0.07
TRIM47-201ENST00000254816 NEIL1Q96FI4 390 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-201ENST00000254816 MIOXQ9UGB7 285 aa15.46■□□□□ 0.07
TRIM47-201ENST00000254816 FAM157AC9JC47 383 aa15.46■□□□□ 0.06
TRIM47-201ENST00000254816 CST7O76096 145 aa15.46■□□□□ 0.06
TRIM47-201ENST00000254816 ID3Q02535 119 aa15.46■□□□□ 0.06
TRIM47-201ENST00000254816 WDR25Q64LD2 544 aaPredicted RBP15.46■□□□□ 0.06
TRIM47-201ENST00000254816 C11orf42Q8N5U0 333 aa15.46■□□□□ 0.06
TRIM47-201ENST00000254816 LYRM2Q9NU23 88 aaPredicted RBP15.46■□□□□ 0.06
TRIM47-201ENST00000254816 CACFD1Q9UGQ2 172 aa15.46■□□□□ 0.06
TRIM47-201ENST00000254816 TRBV23-1A0A0A0MS06 115 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 DVL1P1P54792 670 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-201ENST00000254816 TMEM252Q8N6L7 170 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 TMEM217Q8N7C4 229 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 GAB2Q9UQC2 676 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 MMP24Q9Y5R2 645 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 PIGBOS1A0A0B4J2F0 54 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 KIAA1324LA8MWY0 1029 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-201ENST00000254816 PPT1P50897 306 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 TCTEX1D1Q8N7M0 179 aa15.45■□□□□ 0.06
TRIM47-201ENST00000254816 UBR5O95071 2799 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms