RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MRPL20Q9BYC9 149 aaKnown RBP9.58□□□□□ -0.88
LIN28A-201ENST00000254231 C22orf46C9J442 243 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 TFF3Q07654 80 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 TMEM65Q6PI78 240 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 Q6ZSR3 168 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 R3HDM4Q96D70 268 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 TMEM222Q9H0R3 208 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 SLC35D1Q9NTN3 355 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 SELENOHQ8IZQ5 122 aaKnown RBP9.57□□□□□ -0.88
LIN28A-201ENST00000254231 ZFP82Q8N141 532 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 INSIG2Q9Y5U4 225 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 OTOGQ6ZRI0 2925 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 SNAPC5O75971 98 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 HSPB1P04792 205 aaKnown RBP9.57□□□□□ -0.88
LIN28A-201ENST00000254231 NAT1P18440 290 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 HOXA1P49639 335 aaPredicted RBP9.57□□□□□ -0.88
LIN28A-201ENST00000254231 TMEM33P57088 247 aa9.57□□□□□ -0.88
LIN28A-201ENST00000254231 LOC105371242A0A075B767 164 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 PVALBP20472 110 aaPredicted RBP9.56□□□□□ -0.88
LIN28A-201ENST00000254231 CNTFRP26992 372 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 TGIF2LXQ8IUE1 241 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 OR5C1Q8NGR4 320 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 EAF1Q96JC9 268 aaPredicted RBP9.56□□□□□ -0.88
LIN28A-201ENST00000254231 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 GAL3ST2Q9H3Q3 398 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 SLC2A8Q9NY64 477 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 FCN3O75636 299 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 CFPP27918 469 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 SSTP61278 116 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 C17orf58Q2M2W7 97 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 DNM1P46Q6ZS02 220 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 STPG2Q8N412 459 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 FAM168AQ92567 244 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 IDI2-AS1Q9NZ38 188 aa9.56□□□□□ -0.88
LIN28A-201ENST00000254231 IGKV3-7A0A075B6H7 116 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A10PA6NDY2 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A18PA6NE21 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A16PA6NEW6 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A20PA6NIJ5 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A8PA6NJQ4 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A7PA6NKC0 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 MARCH11A6NNE9 402 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A22PA8MWA6 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A12PA8MX19 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A5PA8MXJ8 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A23PA8MXZ1 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A15PP0C7V4 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A13PP0C7W8 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A14PP0C7W9 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FAM90A24PP0C7X0 464 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 SRSF4Q08170 494 aaKnown RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FGL1Q08830 312 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 WDR25Q64LD2 544 aaPredicted RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 CLEC2AQ6UVW9 174 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 SPICQ8N5J4 248 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 C2CD4CQ8TF44 421 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 MSI2Q96DH6 328 aaKnown RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 SSBP3Q9BWW4 388 aaPredicted RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 LIN7CQ9NUP9 197 aaKnown RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 FBXL17Q9UF56 701 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 CLEC18AA5D8T8 446 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 IFNL4K9M1U5 179 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 RAG2P55895 527 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 KHDC1LQ5JSQ8 128 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 CLEC18CQ8NCF0 446 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 NOTCH1P46531 2555 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 LHBP01229 141 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 ZFP36P26651 326 aaKnown RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 CYCSP99999 105 aaKnown RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 KLF17Q5JT82 389 aaPredicted RBP9.55□□□□□ -0.88
LIN28A-201ENST00000254231 MOB1BQ7L9L4 216 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 OR10W1Q8NGF6 305 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 RITA1Q96K30 269 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 SLC25A32Q9H2D1 315 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 HES4Q9HCC6 221 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 PSENENQ9NZ42 101 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 HIVEP1P15822 2718 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 NACAE9PAV3 2078 aa9.55□□□□□ -0.88
LIN28A-201ENST00000254231 PROP1O75360 226 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 IGHV4-39P01824 125 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 SNCAP37840 140 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 AKR1C3P42330 323 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 MLANAQ16655 118 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 SWI5Q1ZZU3 235 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 CLLU1Q5K131 121 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
LIN28A-201ENST00000254231 ZNF645Q8N7E2 425 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
LIN28A-201ENST00000254231 SH3BGRL3Q9H299 93 aa9.54□□□□□ -0.88
LIN28A-201ENST00000254231 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms