RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TMEM30BQ3MIR4 351 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 LYPD2Q6UXB3 125 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 FAM213BQ8TBF2 198 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 S1PR3Q99500 378 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 PRELID3BQ9Y3B1 194 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 IFNA5P01569 189 aa15.21■□□□□ 0.02
HOXC11-201ENST00000243082 RPL31P62899 125 aaKnown RBP15.21■□□□□ 0.02
HOXC11-201ENST00000243082 SCRT1Q9BWW7 348 aa15.21■□□□□ 0.02
HOXC11-201ENST00000243082 C9JQL5 133 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 F8W036 122 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 ZG16O60844 167 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 KIR2DS2P43631 304 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 DVL1P1P54792 670 aaPredicted RBP15.2■□□□□ 0.02
HOXC11-201ENST00000243082 ERVFRD-1P60508 538 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 HBG1P69891 147 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 HBG2P69892 147 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
HOXC11-201ENST00000243082 LY6DQ14210 128 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 AARDQ4LEZ3 155 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 COMMD1Q8N668 190 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.2■□□□□ 0.02
HOXC11-201ENST00000243082 DTD1Q8TEA8 209 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 ZDHHC16Q969W1 377 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 OR4C12Q96R67 309 aa15.2■□□□□ 0.02
HOXC11-201ENST00000243082 CARHSP1Q9Y2V2 147 aaKnown RBP15.2■□□□□ 0.02
HOXC11-201ENST00000243082 FAM90A9PA6NNJ1 464 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 FAM157AC9JC47 383 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 GNG10P50151 68 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 UNQ6494/PRO21346Q6UXR6 183 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 SLC25A48Q6ZT89 311 aaKnown RBP15.19■□□□□ 0.02
HOXC11-201ENST00000243082 THNSL2Q86YJ6 484 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 LYG1Q8N1E2 194 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 ZCCHC14Q8WYQ9 949 aaKnown RBP15.19■□□□□ 0.02
HOXC11-201ENST00000243082 QTRT1Q9BXR0 403 aaKnown RBP15.19■□□□□ 0.02
HOXC11-201ENST00000243082 IGHV1-69-2A0A0G2JMI3 117 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 DLL1O00548 723 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 PPIHO43447 177 aaKnown RBP15.19■□□□□ 0.02
HOXC11-201ENST00000243082 RBMXL2O75526 392 aaKnown RBP15.19■□□□□ 0.02
HOXC11-201ENST00000243082 GUCA2BQ16661 112 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 TMEM200BQ69YZ2 307 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 SSX9Q7RTT3 188 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 VKORC1L1Q8N0U8 176 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 CA5BP1Q8WTZ4 195 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 SEC11CQ9BY50 192 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 CTSZQ9UBR2 303 aa15.19■□□□□ 0.02
HOXC11-201ENST00000243082 NQO2P16083 231 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 LOXP28300 417 aaPredicted RBP15.18■□□□□ 0.02
HOXC11-201ENST00000243082 SLC25A24Q6NUK1 477 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 ZNF383Q8NA42 475 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 OR10A7Q8NGE5 316 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 GAL3ST2Q9H3Q3 398 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 KAAG1Q9UBP8 84 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 NBASA2RRP1 2371 aa15.18■□□□□ 0.02
HOXC11-201ENST00000243082 PMS2P5A8MQ11 134 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 NDUFB3O43676 98 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 CCL3L1P16619 93 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 THBS3P49746 956 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 OR2B8PP59922 312 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SLC38A11Q08AI6 406 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 LRRC75BQ2VPJ9 315 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 ZNF672Q499Z4 452 aaPredicted RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SPINK9Q5DT21 86 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 OR8G2PQ6IF36 304 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 MUC15Q8N387 334 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 LILRB2Q8N423 598 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 OR4S2Q8NH73 311 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 FBXO7Q9Y3I1 522 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 YLPM1P49750 1951 aaKnown RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 ANKHD1Q8IWZ3 2542 aaKnown RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SFTA3P0C7M3 94 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 LRRC10Q5BKY1 277 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SP5Q6BEB4 398 aaPredicted RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 HEPN1Q6WQI6 88 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 PUSL1Q8N0Z8 303 aaKnown RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SVBPQ8N300 66 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 ZNF714Q96N38 554 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 CIB3Q96Q77 187 aaPredicted RBP15.17■□□□□ 0.02
HOXC11-201ENST00000243082 RSG1Q9BU20 258 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 ZNRD1Q9P1U0 126 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 HCFC1P51610 2035 aa15.17■□□□□ 0.02
HOXC11-201ENST00000243082 CEBPZOSA8MTT3 80 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 DVL1O14640 695 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 OR8U8P0C7N1 319 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 RELBQ01201 579 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 GUK1Q16774 197 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 AKR1C8PQ5T2L2 129 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 SPSB3Q6PJ21 355 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 ADTRPQ96IZ2 230 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 PARD6GQ9BYG4 376 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-201ENST00000243082 NKX6-2Q9C056 277 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-201ENST00000243082 DOCK11Q5JSL3 2073 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 TRAV3A0A0B4J244 114 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 SFTPCP11686 197 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 ERVK-16P61578 105 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 TFF3Q07654 80 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 H1FXQ92522 213 aaKnown RBP15.16■□□□□ 0.02
HOXC11-201ENST00000243082 TMEM204Q9BSN7 226 aa15.16■□□□□ 0.02
HOXC11-201ENST00000243082 WDR61Q9GZS3 305 aaKnown RBP15.16■□□□□ 0.02
HOXC11-201ENST00000243082 TMEM140Q9NV12 185 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms