RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 HLA-DMAP28067 261 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 CDK10Q15131 360 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 ZNF57Q68EA5 555 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-201ENST00000242776 OR10J5Q8NHC4 309 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 UBALD1Q8TB05 177 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 SDHCQ99643 169 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-201ENST00000242776 OR2S2Q9NQN1 319 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 GNG12Q9UBI6 72 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 SLC23A1Q9UHI7 598 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 PSG11Q9UQ72 335 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 HYDINQ4G0P3 5121 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 IGKV1D-8A0A087WSZ0 117 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 A0A087X0M5 115 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 A0A1B0GX30 115 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 IFNA6P05013 189 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 ZBTB25P24278 435 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 HRH1P35367 487 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 CDX1P47902 265 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-201ENST00000242776 FOXE3Q13461 319 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 MEF2DQ14814 521 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 BAK1Q16611 211 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 Q3ZCU0 254 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 IGSF11Q5DX21 431 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 RNASE10Q5GAN6 216 aaKnown RBP10.74□□□□□ -0.69
DDX39A-201ENST00000242776 STEAP1BQ6NZ63 245 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 OR10X1Q8NGY0 326 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 GFOD1Q9NXC2 390 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 EHFQ9NZC4 300 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 TRBV6-7A0A0A0MS04 114 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 IGHV3-43A0A0B4J1X8 118 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 J3QRK9 145 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 LANCL1O43813 399 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 RAB3DO95716 219 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 PMP2P02689 132 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 CD3DP04234 171 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 IGHV3-43DP0DP04 118 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 SPNP16150 400 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 RAB7AP51149 207 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 BORCS5Q969J3 196 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 EAF1Q96JC9 268 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-201ENST00000242776 HSPB9Q9BQS6 159 aa10.74□□□□□ -0.69
DDX39A-201ENST00000242776 CENPXA8MT69 81 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 HSD17B6O14756 317 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 YPEL1O60688 119 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 SAP30O75446 220 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 UPK1BO75841 260 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 CD74P04233 296 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 OR5H8P0DN80 308 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 VDAC1P21796 283 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 TSPAN5P62079 268 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 DYRK1AQ13627 763 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 LY6G6FQ5SQ64 297 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 LYSMD2Q8IV50 215 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 OR8H3Q8N146 312 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 ARRDC1Q8N5I2 433 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 Q8N9W7 124 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 EDARADDQ8WWZ3 215 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 YPEL2Q96QA6 119 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 CITED4Q96RK1 184 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 C7orf50Q9BRJ6 194 aaKnown RBP10.73□□□□□ -0.69
DDX39A-201ENST00000242776 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
DDX39A-201ENST00000242776 IGHV1-3A0A0C4DH29 117 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 DISC1C4P0D8 188 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 M0QYG6 137 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 ELANEP08246 267 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 PPP1CCP36873 323 aaKnown RBP10.72□□□□□ -0.69
DDX39A-201ENST00000242776 CEACAM6P40199 344 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 FHL3Q13643 280 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 KLF9Q13886 244 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-201ENST00000242776 GNMTQ14749 295 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 MORN2Q502X0 79 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 ASPHD1Q5U4P2 390 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 TGIF2LXQ8IUE1 241 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 OR52L2PQ8NGH6 319 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 OR10V1Q8NGI7 309 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 OR1N2Q8NGR9 330 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 DCUN1D4Q92564 292 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 RASL11BQ9BPW5 248 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 GON7Q9BXV9 100 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 TOLLIPQ9H0E2 274 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 LIN7CQ9NUP9 197 aaKnown RBP10.72□□□□□ -0.69
DDX39A-201ENST00000242776 OR1A1Q9P1Q5 309 aa10.72□□□□□ -0.69
DDX39A-201ENST00000242776 NAP1L6A6NFF2 107 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 ITGB1BP1O14713 200 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 GP9P14770 177 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 RFX2P48378 723 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 HERV-K104P61576 105 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 GNB1P62873 340 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 C5orf24Q7Z6I8 188 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 H1FOOQ8IZA3 346 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-201ENST00000242776 C8orf31Q8N9H6 132 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 OR2AK2Q8NG84 335 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 OR4C16Q8NGL9 310 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 OR6F1Q8NGZ6 308 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 ABHD14AQ9BUJ0 271 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 TINAGL1Q9GZM7 467 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-201ENST00000242776 ALX4Q9H161 411 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms