RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TRAT1Q6PIZ9 186 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 PIP4P1Q86T03 277 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 DRAM1Q8N682 238 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF525Q8N782 197 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM217Q8N7C4 229 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 CLDND2Q8NHS1 167 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 KLF14Q8TD94 323 aaPredicted RBP6.53□□□□□ -1.36
CXCR4-201ENST00000241393 C2CD4CQ8TF44 421 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 GALMQ96C23 342 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 BCL2L14Q9BZR8 327 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 SIRT7Q9NRC8 400 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 PSENENQ9NZ42 101 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 LAMP3Q9UQV4 416 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 TIMM9Q9Y5J7 89 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 TRAV17A0A0B4J275 112 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 C5orf52A6NGY3 159 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 B4DEV8 164 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 UBE2CO00762 179 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 P0C879 139 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 OR13C7P0DN81 318 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CEACAM6P40199 344 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 AKR1D1P51857 326 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CASP6P55212 293 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CCL20P78556 96 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 RUNX1Q01196 453 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 TRIP6Q15654 476 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 IGFBP7Q16270 282 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 LRRC75BQ2VPJ9 315 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 SLC25A24Q6NUK1 477 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CENPVQ7Z7K6 275 aaPredicted RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 MYPOPQ86VE0 399 aaPredicted RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 YPEL4Q96NS1 127 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 RARRES2Q99969 163 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 TCEAL7Q9BRU2 100 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 ESRP2Q9H6T0 727 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 KCNS2Q9ULS6 477 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 PPP1R3CQ9UQK1 317 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 MED12LQ86YW9 2145 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1W2PPH5 198 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 H3BQ15 152 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 WDR1O75083 606 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 LYZL6O75951 148 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 IGLV1-44P01699 117 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 S100A6P06703 90 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 IL2RGP31785 369 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 TAGLN2P37802 199 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 RPL35P42766 123 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 MEOX2P50222 304 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 RPS23P62266 143 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 PNRC1Q12796 327 aaPredicted RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 EIF2S3LQ2VIR3 472 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 AKIRIN2Q53H80 203 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 ATP1A1-AS1Q5TC04 95 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM14EPQ6UXP3 125 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 ACP7Q6ZNF0 438 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 C11orf53Q8IXP5 236 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 FGFRL1Q8N441 504 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 WDR31Q8NA23 367 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 TVP23CQ96ET8 276 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 LURAP1Q96LR2 239 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 P2RX4Q99571 388 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 NIPSNAP3BQ9BS92 247 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 MRPL37Q9BZE1 423 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 WDR61Q9GZS3 305 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 CISD1Q9NZ45 108 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 METTL1Q9UBP6 276 aaKnown RBP6.52□□□□□ -1.37
CXCR4-201ENST00000241393 OR14J1Q9UGF5 321 aa6.52□□□□□ -1.37
CXCR4-201ENST00000241393 FAM186AA6NE01 2351 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 PCNX2A6NKB5 2137 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 TEX22C9J3V5 150 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 C12orf77C9JDV5 145 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 RHODO00212 210 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 MLNRO43193 412 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 OR2C1O95371 312 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 IFNA1P01562 189 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 IFNA17P01571 189 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 MPV17P39210 176 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 EIF2S3P41091 472 aaKnown RBP6.51□□□□□ -1.37
CXCR4-201ENST00000241393 AKR1C3P42330 323 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 UBE2KP61086 200 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 ERVS71-1P61550 626 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 TNFRSF9Q07011 255 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM267Q0VDI3 215 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-201ENST00000241393 ESPL1Q14674 2120 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 P2RY6Q15077 328 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 SMIM21Q3B7S5 101 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 ALKBH6Q3KRA9 238 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 KRBOX4Q5JUW0 171 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 MUCL1Q96DR8 90 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 CIB3Q96Q77 187 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-201ENST00000241393 TAAR6Q96RI8 345 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 C12orf57Q99622 126 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms