RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 CD55P08174 381 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 IRF2P14316 349 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 GPR12P47775 334 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 DSCR9P59020 149 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 RPL30P62888 115 aaKnown RBP7.17□□□□□ -1.26
VPS4B-201ENST00000238497 SRPXP78539 464 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 SRSF4Q08170 494 aaKnown RBP7.17□□□□□ -1.26
VPS4B-201ENST00000238497 TMEM249Q2WGJ8 235 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 C2CD4CQ8TF44 421 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 SLC25A31Q9H0C2 315 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 ZNRD1Q9P1U0 126 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 WIPI2Q9Y4P8 454 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 C17orf98A8MV24 154 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 S1PR2O95136 353 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 FAM157CP0CG43 387 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 NPBWR1P48145 328 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 UCP3P55916 312 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 RPL39P5Q59GN2 51 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 H2BFWTQ7Z2G1 175 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 H1FOOQ8IZA3 346 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-201ENST00000238497 FAM185AQ8N0U4 392 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 CD177Q8N6Q3 437 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 FAM169BQ8N8A8 192 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 NUP37Q8NFH4 326 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 ZDHHC16Q969W1 377 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 COQ2Q96H96 371 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 RARRES2Q99969 163 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 SAV1Q9H4B6 383 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-201ENST00000238497 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A10PA6NDY2 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A20PA6NIJ5 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A8PA6NJQ4 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A7PA6NKC0 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A22PA8MWA6 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A12PA8MX19 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A23PA8MXZ1 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 PPIHO43447 177 aaKnown RBP7.16□□□□□ -1.26
VPS4B-201ENST00000238497 ATG12O94817 140 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 TGFAP01135 160 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A13PP0C7W8 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM90A24PP0C7X0 464 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 DEFA4P12838 97 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 SLC25A16P16260 332 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 ZNF497Q6ZNH5 498 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 SVBPQ8N300 66 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 RXFP4Q8TDU9 374 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 C19orf12Q9NSK7 152 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 MLXQ9UH92 298 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 C9JQL5 133 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 SYNGR2O43760 224 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 PAX1P15863 534 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 REG1BP48304 166 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 IL15RAQ13261 267 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 LYG1Q8N1E2 194 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 FAM216BQ8N7L0 139 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 C10orf105Q8TEF2 133 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 BOD1Q96IK1 185 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 DECR2Q9NUI1 292 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 URGCP-MRPS24S4R325 110 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 IGHV4-61A0A0C4DH41 118 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 UCP1P25874 307 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 P2RY1P47900 373 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 F2RL1P55085 397 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 CCL20P78556 96 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 GUK1Q16774 197 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 UTF1Q5T230 341 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 C11orf53Q8IXP5 236 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 MMP26Q9NRE1 261 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 ZFP57Q9NU63 452 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 GNG13Q9P2W3 67 aa7.16□□□□□ -1.26
VPS4B-201ENST00000238497 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.26
VPS4B-201ENST00000238497 IFNA10P01566 189 aa7.15□□□□□ -1.26
VPS4B-201ENST00000238497 ZNF266Q14584 549 aa7.15□□□□□ -1.26
VPS4B-201ENST00000238497 EFNB3Q15768 340 aa7.15□□□□□ -1.26
VPS4B-201ENST00000238497 IL17RELQ6ZVW7 336 aa7.15□□□□□ -1.26
VPS4B-201ENST00000238497 NEU4Q8WWR8 484 aaPredicted RBP7.15□□□□□ -1.26
VPS4B-201ENST00000238497 LIN7CQ9NUP9 197 aaKnown RBP7.15□□□□□ -1.26
VPS4B-201ENST00000238497 AUP1Q9Y679 476 aa7.15□□□□□ -1.26
VPS4B-201ENST00000238497 OOEPA6NGQ2 149 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 H0Y980 276 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 ARG1P05089 322 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 HOXB4P17483 251 aaPredicted RBP7.15□□□□□ -1.27
VPS4B-201ENST00000238497 ADCYAP1P18509 176 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 GPR6P46095 362 aaPredicted RBP7.15□□□□□ -1.27
VPS4B-201ENST00000238497 DLX1P56177 255 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 CATR1Q13166 79 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 C3orf36Q3SXR2 165 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 PRAMEF5Q5TYX0 476 aa7.15□□□□□ -1.27
VPS4B-201ENST00000238497 GCSAMQ8N6F7 178 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms