RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 LMO4P61968 165 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 ZNF471Q9BX82 626 aaPredicted RBP12.39□□□□□ -0.43
HDHD3-201ENST00000238379 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
HDHD3-201ENST00000238379 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.39□□□□□ -0.43
HDHD3-201ENST00000238379 ONECUT1Q9UBC0 465 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 ARHGAP32A7KAX9 2087 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 USP9YO00507 2555 aaPredicted RBP12.38□□□□□ -0.43
HDHD3-201ENST00000238379 FAM90A26D6RGX4 464 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 WRBO00258 174 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 GPR137BO60478 399 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 CRYZL1O95825 349 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 NQO2P16083 231 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 ARF6P62330 175 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
HDHD3-201ENST00000238379 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
HDHD3-201ENST00000238379 DIAPH2-AS1Q14236 149 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 ZC4H2Q9NQZ6 224 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
HDHD3-201ENST00000238379 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 FAM24AA6NFZ4 105 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 SYNGR2O43760 224 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 REG1BP48304 166 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 VAMP2P63027 116 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 OR5AN1Q8NGI8 311 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
HDHD3-201ENST00000238379 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
HDHD3-201ENST00000238379 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 LYRM2Q9NU23 88 aaPredicted RBP12.37□□□□□ -0.43
HDHD3-201ENST00000238379 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 M0R1W7 72 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 TAAR5O14804 337 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 HTR2BP41595 481 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 CAV2P51636 162 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 PRRX1P54821 245 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 TNFRSF9Q07011 255 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 CLEC9AQ6UXN8 241 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 NABP2Q9BQ15 211 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 FBXL17Q9UF56 701 aa12.37□□□□□ -0.43
HDHD3-201ENST00000238379 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 H0YJW9 148 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 ATP5J2P56134 94 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 UBE2KP61086 200 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 ERVK-16P61578 105 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 NHLH2Q02577 135 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 PAX2Q02962 417 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 POU2AF1Q16633 256 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 AARDQ4LEZ3 155 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 DHRS7BQ6IAN0 325 aaPredicted RBP12.36□□□□□ -0.43
HDHD3-201ENST00000238379 C1orf122Q6ZSJ8 110 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 TMEM252Q8N6L7 170 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 NRGNQ92686 78 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 RHOVQ96L33 236 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
HDHD3-201ENST00000238379 WSB1Q9Y6I7 421 aa12.36□□□□□ -0.43
HDHD3-201ENST00000238379 ASH1LQ9NR48 2969 aaKnown RBP12.35□□□□□ -0.43
HDHD3-201ENST00000238379 A8MXK9 166 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 PLA2G2AP14555 144 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 COX7A1P24310 79 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 IL3RAP26951 378 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDHD3-201ENST00000238379 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
HDHD3-201ENST00000238379 NDUFA5Q16718 116 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 OR8H3Q8N146 312 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 OR13D1Q8NGV5 346 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 FAM168AQ92567 244 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 TMEM140Q9NV12 185 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 MED13LQ71F56 2210 aa12.35□□□□□ -0.43
HDHD3-201ENST00000238379 RPS10-NUDT3A0A1W2PQS6 291 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 VWC2LB2RUY7 222 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 ENSAO43768 121 aaKnown RBP12.34□□□□□ -0.43
HDHD3-201ENST00000238379 RRASP10301 218 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PRTN3P24158 256 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 COL8A1P27658 744 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 LCN2P80188 198 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
HDHD3-201ENST00000238379 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PNKDQ8N490 385 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 KIR3DL3Q8N743 410 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms