RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 USF3Q68DE3 2245 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 KBTBD11-OT1A0A1B0GTJ5 212 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 A0A1W2PPE2 198 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 A0A1W2PPH5 198 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 C1orf196B1AJZ1 125 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 OR9G9P0C7N8 305 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 BMP5P22003 454 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 EDDM3BP56851 147 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.38□□□□□ -0.27
UBE3D-201ENST00000237186 DDB2Q92466 427 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF665Q9H7R5 613 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 LAMA5O15230 3695 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 DSPP15924 2871 aaKnown RBP13.38□□□□□ -0.27
UBE3D-201ENST00000237186 CEBPZOSA8MTT3 80 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 FCGR3BO75015 233 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 NDUFS6O75380 124 aaKnown RBP13.38□□□□□ -0.27
UBE3D-201ENST00000237186 RBMXL2O75526 392 aaKnown RBP13.38□□□□□ -0.27
UBE3D-201ENST00000237186 ARG1P05089 322 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 FBP1P09467 338 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 RAB5AP20339 215 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 TNFSF4P23510 183 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 CCKARP32238 428 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 SPCS3P61009 180 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 SSX8Q7RTT4 187 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
UBE3D-201ENST00000237186 QTRT1Q9BXR0 403 aaKnown RBP13.38□□□□□ -0.27
UBE3D-201ENST00000237186 SVILO95425 2214 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 A0A0G2JNJ9 132 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 MAP1LC3B2A6NCE7 125 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 CXorf65A6NEN9 183 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 M0R1X1 148 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 PRRG2O14669 202 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 IGKV1D-33P01593 117 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 IGKV1-33P01594 117 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 NQO2P16083 231 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 TMEM30BQ3MIR4 351 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 FAM201AQ5SY85 155 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 FAM90A2PQ658T7 463 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 TMEM108Q6UXF1 575 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 FAM24BQ8N5W8 94 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 MAP1LC3BQ9GZQ8 125 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 SLC39A9Q9NUM3 307 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 Q9UFV3 132 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 VAX2Q9UIW0 290 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 DCHS1Q96JQ0 3298 aa13.37□□□□□ -0.27
UBE3D-201ENST00000237186 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
UBE3D-201ENST00000237186 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 B4DEV8 164 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 C16orf97H3BN30 126 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 OR2C1O95371 312 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 IFNA1P01562 189 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 IFNA4P05014 189 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 DLK1P80370 383 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 RPL39P5Q59GN2 51 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF788Q6ZQV5 615 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 CORO2AQ92828 525 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 GAFA1Q96PS6 74 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 S1PR3Q99500 378 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 SIRT7Q9NRC8 400 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 APC2O95996 2303 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 CADP27708 2225 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 SOX15O60248 233 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 FGF7P21781 194 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 TAGLN2P37802 199 aaKnown RBP13.36□□□□□ -0.27
UBE3D-201ENST00000237186 ELLP55199 621 aaPredicted RBP13.36□□□□□ -0.27
UBE3D-201ENST00000237186 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
UBE3D-201ENST00000237186 PNRC1Q12796 327 aaPredicted RBP13.36□□□□□ -0.27
UBE3D-201ENST00000237186 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 RBMS3Q6XE24 437 aaKnown RBP13.36□□□□□ -0.27
UBE3D-201ENST00000237186 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF251Q9BRH9 671 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
UBE3D-201ENST00000237186 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 SLC31A2O15432 143 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 SELLP14151 372 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
UBE3D-201ENST00000237186 RELBQ01201 579 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 ZFP82Q8N141 532 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 LHX4Q969G2 390 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 NPCDR1Q9BY65 106 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
UBE3D-201ENST00000237186 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
UBE3D-201ENST00000237186 C5orf52A6NGY3 159 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 IFNA17P01571 189 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 VDAC2P45880 294 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-201ENST00000237186 CEBPGP53567 150 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms