RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CBR3O75828 277 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 NGFP01138 241 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 KIR2DS4P43632 304 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 RPL15P61313 204 aaKnown RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 RELBQ01201 579 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 KIR2DS1Q14954 304 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 OCIAD1Q9NX40 245 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 OR10G9Q8NGN4 311 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 OR10G7Q8NGN6 311 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 C19orf25Q9UFG5 118 aaPredicted RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 DPRXA6NFQ7 191 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 H0Y980 276 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF253O75346 499 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 NAPSAO96009 420 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 TSPOP30536 169 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 TAF15Q92804 592 aaKnown RBP eCLIP11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 CHRNA10Q9GZZ6 450 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 IGHV2-70DA0A0C4DH43 119 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 HLA-DRB5Q30154 266 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 Q56UQ5 140 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 ACSM6Q6P461 480 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 FADS6Q8N9I5 356 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 PLPPR2Q96GM1 343 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 OR2W1Q9Y3N9 320 aa11.97□□□□□ -0.49
PCDHB3-201ENST00000231130 LOC102725191A0A1B0GVB3 256 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 TMEM250H0YL14 139 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 CD99P14209 185 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 LIFP15018 202 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 OR8B8Q15620 311 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC24A4Q8NFF2 622 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 PINX1Q96BK5 328 aaKnown RBP11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 WDR61Q9GZS3 305 aaKnown RBP11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 CHTOPQ9Y3Y2 248 aaKnown RBP11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 YPEL1O60688 119 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 TYMSP04818 313 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 CCL7P80098 99 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 YPEL2Q96QA6 119 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
PCDHB3-201ENST00000231130 IGKV1-5P01602 117 aa11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 DSCR4P56555 118 aaPredicted RBP11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 LRRC75BQ2VPJ9 315 aa11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 MED12LQ86YW9 2145 aa11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.5
PCDHB3-201ENST00000231130 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 ASCL4Q6XD76 172 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 NIT1Q86X76 327 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 PPBPP02775 128 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 IGFBP4P22692 258 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 G6PCP35575 357 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 LTBRP36941 435 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 LINC00205P59089 165 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 SERF2P84101 59 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TFF3Q07654 80 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 ZNF439Q8NDP4 499 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 OR10D3Q8NH80 312 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 A0A1W2PQM1 296 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 FAM166BA8MTA8 275 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 RHBDL1O75783 438 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TCL1AP56279 114 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 STUMQ69YW2 141 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 RPS19BP1Q86WX3 136 aaKnown RBP11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 ZNF114Q8NC26 417 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TIMM8BQ9Y5J9 83 aaPredicted RBP11.95□□□□□ -0.5
PCDHB3-201ENST00000231130 TRAV30A0A087WSZ9 112 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 OR2T8A6NH00 312 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 COL8A2P25067 703 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 SSR4P51571 173 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 SP5Q6BEB4 398 aaPredicted RBP11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 OR10G8Q8NGN5 311 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 ZDHHC16Q969W1 377 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 ZNF891A8MT65 544 aaPredicted RBP11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 SYNGR4O95473 234 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 ATP5G3P48201 142 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 CLDN15P56746 228 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 FGF12P61328 243 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms