RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TMEM133Q9H2Q1 129 aa4.84□□□□□ -1.63
RFX4-201ENST00000229387 PNRC2Q9NPJ4 139 aaKnown RBP4.84□□□□□ -1.63
RFX4-201ENST00000229387 ANAPC10Q9UM13 185 aa4.84□□□□□ -1.63
RFX4-201ENST00000229387 B3GALT5Q9Y2C3 310 aa4.84□□□□□ -1.63
RFX4-201ENST00000229387 SIT1Q9Y3P8 196 aa4.84□□□□□ -1.63
RFX4-201ENST00000229387 LRP5LA4QPB2 252 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 TMEM250H0YL14 139 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 KIR2DS3K7RE56 304 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 NKX2-8O15522 239 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 NUDT14O95848 222 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 KRASP01116 189 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 ZNF728P0DKX0 622 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 IGLL1P15814 213 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 KIR2DS3Q14952 304 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 CBLN3Q6UW01 205 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 CPEB2Q7Z5Q1 589 aaKnown RBP4.84□□□□□ -1.64
RFX4-201ENST00000229387 LRRC75AQ8NAA5 344 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 ZFP62Q8NB50 900 aaPredicted RBP4.84□□□□□ -1.64
RFX4-201ENST00000229387 OR4F5Q8NH21 305 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 ZNF524Q96C55 264 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 GMPPAQ96IJ6 420 aaPredicted RBP4.84□□□□□ -1.64
RFX4-201ENST00000229387 KCNS1Q96KK3 526 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 C19orf24Q9BVV8 132 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 ULBP2Q9BZM5 246 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 EHFQ9NZC4 300 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 C1RLQ9NZP8 487 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 CACNA1EQ15878 2313 aa4.84□□□□□ -1.64
RFX4-201ENST00000229387 NCOR1O75376 2440 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 LOC400499M0QZD8 3231 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 IGHV5-51A0A0C4DH38 117 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 A0A1B0GTH9 108 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A18PA6NE21 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A16PA6NEW6 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A9PA6NNJ1 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A5PA8MXJ8 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 PITX3O75364 302 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 SCGB2A1O75556 95 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 TTRP02766 147 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A15PP0C7V4 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A14PP0C7W9 464 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 ZNF684Q5T5D7 378 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 CA13Q8N1Q1 262 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 ZNF611Q8N823 705 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 C18orf32Q8TCD1 76 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 NMNAT3Q96T66 252 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 SPIN2AQ99865 258 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 SPIN2BQ9BPZ2 258 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 PRSS27Q9BQR3 290 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 ANAPC13Q9BS18 74 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FNDC4Q9H6D8 234 aaPredicted RBP4.83□□□□□ -1.64
RFX4-201ENST00000229387 PLEKHF2Q9H8W4 249 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 MED29Q9NX70 200 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 HEBP2Q9Y5Z4 205 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 NSG1A0A0A6YYJ2 146 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 A0A1B0GWA3 101 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 SLC22A20A6NK97 555 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 CD300LBA8K4G0 201 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 DEGS1O15121 323 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 IFNA1P01562 189 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 IGHG3P01860 377 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FSTP19883 344 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 EDN2P20800 178 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 KIR2DL2P43627 348 aaPredicted RBP4.83□□□□□ -1.64
RFX4-201ENST00000229387 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
RFX4-201ENST00000229387 TLE1Q04724 770 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FMODQ06828 376 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 BAGE3Q86Y29 109 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 FBXL14Q8N1E6 418 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 SMIM7Q9BQ49 75 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 STRADBQ9C0K7 418 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 ONECUT1Q9UBC0 465 aa4.83□□□□□ -1.64
RFX4-201ENST00000229387 TRBV9A0A0B4J1U6 114 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SPTY2D1-AS1A0A0U1RR47 76 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PRR19A6NJB7 356 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SHISA7A6NL88 538 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 C11orf98E9PRG8 122 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TM4SF5O14894 197 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 HLA-DQA2P01906 255 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SLC6A6P31641 620 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 HRH1P35367 487 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PAX9P55771 341 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PPP1CBP62140 327 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 GRB2P62993 217 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 TBR1Q16650 682 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 ZNF550Q7Z398 422 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 ZNF676Q8N7Q3 588 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SGMS2Q8NHU3 365 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 FNDC9Q8TBE3 224 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PLPPR1Q8TBJ4 325 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 DAZLQ92904 295 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms