RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TIMM8AO60220 97 aaPredicted RBP13.58□□□□□ -0.24
LTBR-201ENST00000228918 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 KITLGP21583 273 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 HOXC12P31275 282 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 SOX8P57073 446 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
LTBR-201ENST00000228918 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
LTBR-201ENST00000228918 TLE1Q04724 770 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 C4orf17Q53FE4 359 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 CNEP1R1Q8N9A8 125 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 ACTR3CQ9C0K3 210 aaPredicted RBP13.58□□□□□ -0.24
LTBR-201ENST00000228918 PARLQ9H300 379 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 PRR14LQ5THK1 2151 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 CACNA1GO43497 2377 aa13.58□□□□□ -0.24
LTBR-201ENST00000228918 PFN1P07737 140 aaKnown RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 LINC00205P59089 165 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 SMIM21Q3B7S5 101 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 RBM14Q96PK6 669 aaKnown RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 HSD17B10Q99714 261 aaKnown RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 PYGO2Q9BRQ0 406 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 MARCH11A6NNE9 402 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 VWA1Q6PCB0 445 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 RAB24Q969Q5 203 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 PACRGQ96M98 296 aaPredicted RBP13.57□□□□□ -0.24
LTBR-201ENST00000228918 MSL2Q9HCI7 577 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 FZR1Q9UM11 496 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 PSG11Q9UQ72 335 aa13.57□□□□□ -0.24
LTBR-201ENST00000228918 A8MWP6 167 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 TCAPO15273 167 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 RBMXL2O75526 392 aaKnown RBP13.56□□□□□ -0.24
LTBR-201ENST00000228918 CECR9P0C854 216 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 KIR2DL2P43627 348 aaPredicted RBP13.56□□□□□ -0.24
LTBR-201ENST00000228918 GNB2P62879 340 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 TGIF2LXQ8IUE1 241 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 OR4F5Q8NH21 305 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 RFESDQ8TAC1 157 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 OR4F4Q96R69 305 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 HIST1H2BLQ99880 126 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 SRD5A3Q9H8P0 318 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 C15orf65H3BRN8 121 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 ZNF709Q8N972 641 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 SNX22Q96L94 193 aa13.56□□□□□ -0.24
LTBR-201ENST00000228918 C15orf62A8K5M9 175 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 DEFB108AA8MXU0 73 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 WISP2O76076 250 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 HTD2P86397 168 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 PAX5Q02548 391 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 Q8N7P7 452 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 OR4X1Q8NH49 305 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 C17orf112F2Z3M2 114 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 H7BYZ3 331 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 TUBG1P23258 451 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 FABP6P51161 128 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 FOXF2Q12947 444 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 TRAT1Q6PIZ9 186 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 CD177Q8N6Q3 437 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 R3HDM4Q96D70 268 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 DIRC2Q96SL1 478 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 DCTN5Q9BTE1 182 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 QTRT1Q9BXR0 403 aaKnown RBP13.55□□□□□ -0.24
LTBR-201ENST00000228918 TUBG2Q9NRH3 451 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
LTBR-201ENST00000228918 HCFC1P51610 2035 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 SMCO3A2RU48 225 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 M0R296 226 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 SPINT2O43291 252 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 ADH4P08319 380 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 OR9G9P0C7N8 305 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 DEFA4P12838 97 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 GALR1P47211 349 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 JOSD1Q15040 202 aaPredicted RBP13.54□□□□□ -0.24
LTBR-201ENST00000228918 ZNF718Q3SXZ3 478 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 NECAP1Q8NC96 275 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 GAB2Q9UQC2 676 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
LTBR-201ENST00000228918 PAGE4O60829 102 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 CDC34P49427 236 aaPredicted RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 NUTF2P61970 127 aaKnown RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 AARDQ4LEZ3 155 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 BEND2Q8NDZ0 799 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 LRRC29Q8WV35 223 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 NEIL1Q96FI4 390 aaPredicted RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 NOL4LQ96MY1 436 aaPredicted RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 PPP1R14DQ9NXH3 145 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 OR6C3Q9NZP0 311 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 PRRC2CQ9Y520 2896 aaKnown RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 DVL1O14640 695 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms