RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OR5AU1Q8NGC0 362 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 TMEM56-RWDD3S4R434 201 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 PITX3O75364 302 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 SPRR3Q9UBC9 169 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 INTS1Q8N201 2190 aaKnown RBP15.7■□□□□ 0.1
CLIP2-201ENST00000223398 MELTFP08582 738 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 ZNF818PQ6ZRF7 136 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 C1QL2Q7Z5L3 287 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 FLVCR1-AS1Q8TAF5 88 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 ISOC2Q96AB3 205 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 GPR132Q9UNW8 380 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 NPIPB9F8W1W9 429 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 SEC11CQ9BY50 192 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 MTCL1Q9Y4B5 1905 aaKnown RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 IL22RA2Q969J5 263 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 PARD6AQ9NPB6 346 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 LOC102723996A0A087X1L8 192 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 IGHV3-49A0A0A0MS15 119 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 PDE6DO43924 150 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 HIST1H1BP16401 226 aaKnown RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 HSPE1P61604 102 aaKnown RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 AWAT1Q58HT5 328 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 FAM209AQ5JX71 171 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 TMEM252Q8N6L7 170 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 VAMP8Q9BV40 100 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 TOLLIPQ9H0E2 274 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 HSF4Q9ULV5 492 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 NPIPB11E5RHQ5 1161 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 TBX6O95947 436 aaPredicted RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 DNM1P46Q6ZS02 220 aa15.69■□□□□ 0.1
CLIP2-201ENST00000223398 SELENOHQ8IZQ5 122 aaKnown RBP15.69■□□□□ 0.1
CLIP2-201ENST00000223398 DLK1P80370 383 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 C1orf162Q8NEQ5 155 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-201ENST00000223398 ZNF430Q9H8G1 570 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-201ENST00000223398 TRGV3P03979 118 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 LGALSLQ3ZCW2 172 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-201ENST00000223398 OR52M1Q8NGK5 317 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 PATJQ8NI35 1801 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 NPIPB13A6NJU9 1138 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 NPIPB4C9JG80 1138 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 ZNF253O75346 499 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 SRSF6Q13247 344 aaKnown RBP15.68■□□□□ 0.1
CLIP2-201ENST00000223398 PPP1R3EQ9H7J1 279 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 M0R2Z0 102 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 IGKV1D-33P01593 117 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 IGKV1-33P01594 117 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 PMS2P11Q13670 270 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 UNQ6494/PRO21346Q6UXR6 183 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 KLHDC1Q8N7A1 406 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 P2RY4P51582 365 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 CLRN3Q8NCR9 226 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 FBXL15Q9H469 300 aa15.68■□□□□ 0.1
CLIP2-201ENST00000223398 J3QW42 95 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 TWIST1Q15672 202 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 DRAM1Q8N682 238 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 LSM10Q969L4 123 aaKnown RBP15.67■□□□□ 0.1
CLIP2-201ENST00000223398 ACACAQ13085 2346 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 FAM181BA6NEQ2 426 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 C17orf100A8MU93 164 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 SNRNP200O75643 2136 aaKnown RBP15.67■□□□□ 0.1
CLIP2-201ENST00000223398 IGHV3-66A0A0C4DH42 116 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 PGPA6NDG6 321 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 ZNF207O43670 478 aaKnown RBP15.67■□□□□ 0.1
CLIP2-201ENST00000223398 STPG3Q8N7X2 389 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 OR10D4PQ8NGN7 298 aa15.67■□□□□ 0.1
CLIP2-201ENST00000223398 TRAV34A0A0B4J273 112 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 DEDDO75618 318 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 ASPHD2Q6ICH7 369 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 ZNF841Q6ZN19 808 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 BPIFA4PQ86YQ2 179 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 IER3P46695 156 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 HIST3H3Q16695 136 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 EEF1AKMT3Q96AZ1 226 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 GNLYP22749 145 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 RAX2Q96IS3 184 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 DPM3Q9P2X0 92 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 TCF19Q9Y242 345 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 A0A0G2JMZ2 1700 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 LRRC37A2A6NM11 1700 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 LOC389332A0A1B0GUA5 103 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 LOC390937A0A1W2PQ73 354 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 KBTBD11O94819 623 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 CD81P60033 236 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 TMEM97Q5BJF2 176 aa15.66■□□□□ 0.1
CLIP2-201ENST00000223398 CRISP2P16562 243 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 TMEM189A5PLL7 270 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 RPL13AP40429 203 aaKnown RBP15.65■□□□□ 0.1
CLIP2-201ENST00000223398 SELENOTP62341 195 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 FOXF2Q12947 444 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 TCTEX1D1Q8N7M0 179 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 ANAPC16Q96DE5 110 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 PNRC1Q12796 327 aaPredicted RBP15.65■□□□□ 0.1
CLIP2-201ENST00000223398 C1QTNF12Q5T7M4 302 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 C9orf62Q8N4C0 152 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 C12orf77C9JDV5 145 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 ADAM11O75078 769 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 OR13A1Q8NGR1 328 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 OR10C1Q96KK4 312 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms