RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZIC3O60481 467 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 ELOBQ15370 118 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 RSPO4Q2I0M5 234 aaPredicted RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 NHLRC3Q5JS37 347 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 C1QL2Q7Z5L3 287 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 OR1L6Q8NGR2 347 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 LILRB1Q8NHL6 650 aaPredicted RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 POM121Q96HA1 1249 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 IMMP1LQ96LU5 166 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 RBKSQ9H477 322 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 HIGD1AQ9Y241 93 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 BDP1A6H8Y1 2624 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.837e-8■■■■■ 29.7
NOD1-201ENST00000222823 PRR32B1ATL7 298 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 MELTFP08582 738 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 MFAP2P55001 183 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 TMPRSS3P57727 454 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 IZUMO4Q1ZYL8 232 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 SELENOHQ8IZQ5 122 aaKnown RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 PUSL1Q8N0Z8 303 aaKnown RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 OR52M1Q8NGK5 317 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 SFXN3Q9BWM7 321 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 SYNGR3O43761 229 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 NDUFB4O95168 129 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 CD40P25942 277 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 SUCLG1P53597 346 aaKnown RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 UCP3P55916 312 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 TXNDC17Q9BRA2 123 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 PITPNC1Q9UKF7 332 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 MYO7BQ6PIF6 2116 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 CORTO00230 105 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 SLC25A17O43808 307 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 GDF9O60383 454 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 CYB5R3P00387 301 aaPredicted RBP9.83□□□□□ -0.84
NOD1-201ENST00000222823 NAT2P11245 290 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 MRPL14Q6P1L8 145 aaKnown RBP9.83□□□□□ -0.84
NOD1-201ENST00000222823 CLEC2AQ6UVW9 174 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 PQLC2Q6ZP29 291 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 GTF2H5Q6ZYL4 71 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 CALHM1Q8IU99 346 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 TMEM116Q8NCL8 245 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 PCNX1Q96RV3 2341 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 SCNM1Q9BWG6 230 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 JPT1Q9UK76 154 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 RNF115Q9Y4L5 304 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 HTN1P15515 57 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 TNFRSF9Q07011 255 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 GFI1Q99684 422 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 IDI2-AS1Q9NZ38 188 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 IFNL4K9M1U5 179 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 ISLRO14498 428 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 LRRC75BQ2VPJ9 315 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 ZNF818PQ6ZRF7 136 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 C16orf82Q7Z2V1 217 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 OR4A5Q8NH83 315 aa9.83□□□□□ -0.84
NOD1-201ENST00000222823 METTL1Q9UBP6 276 aaKnown RBP9.83□□□□□ -0.84
NOD1-201ENST00000222823 HSPB1P04792 205 aaKnown RBP9.82□□□□□ -0.84
NOD1-201ENST00000222823 MIC13Q5XKP0 118 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 TMEM45BQ96B21 275 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 IGLV3-12A0A075B6K2 115 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 PLAUP00749 431 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 HIST1H1BP16401 226 aaKnown RBP9.82□□□□□ -0.84
NOD1-201ENST00000222823 GLRXP35754 106 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 RND2P52198 227 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 ASPHD2Q6ICH7 369 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 DRAM1Q8N682 238 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 RAB24Q969Q5 203 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 P2RX4Q99571 388 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
NOD1-201ENST00000222823 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 ZG16O60844 167 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 CSRP2Q16527 193 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 OR5P3Q8WZ94 311 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 DENND4CQ5VZ89 1909 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 A8MWL6 223 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 S1PR2O95136 353 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 ZNF735P0CB33 412 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 MDKP21741 143 aaPredicted RBP9.82□□□□□ -0.84
NOD1-201ENST00000222823 TCF19Q9Y242 345 aa9.82□□□□□ -0.84
NOD1-201ENST00000222823 DOCK9Q9BZ29 2069 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 PTBP3O95758 552 aaKnown RBP9.81□□□□□ -0.84
NOD1-201ENST00000222823 ZNF137PP52743 207 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 ARF6P62330 175 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 PAFAH1B2P68402 229 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 TMEM187Q14656 261 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 TLNRD1Q9H1K6 362 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 OBSL1O75147 1896 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 SIGLEC5O15389 551 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 KBTBD11O94819 623 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 FAM106CPP0CH98 169 aa9.81□□□□□ -0.84
NOD1-201ENST00000222823 TIMM23BQ5SRD1 257 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms