RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR11H7Q8NGC8 314 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 GPR132Q9UNW8 380 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 PHLDA3Q9Y5J5 127 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 DPM3Q9P2X0 92 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 TDRD15B5MCY1 1934 aaKnown RBP16.19■□□□□ 0.18
SMPD3-201ENST00000219334 OR1N2Q8NGR9 330 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 RTN4RQ9BZR6 473 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 TRGV3P03979 118 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 ZNRF1Q8ND25 227 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 PACRGQ96M98 296 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-201ENST00000219334 AKIRIN1Q9H9L7 192 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-201ENST00000219334 LOC390937A0A1W2PQ73 354 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF345Q14585 488 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 TXNDC17Q9BRA2 123 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 DNAJC4Q9NNZ3 241 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 GPR146Q96CH1 333 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 Q96M66 194 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 C7orf69Q9H7B7 122 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 GPX1P07203 203 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 TUBD1Q9UJT1 453 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 FUT9Q9Y231 359 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 REG1AP05451 166 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF708P17019 499 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 CEBPEQ15744 281 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 UBE2V2Q15819 145 aa16.18■□□□□ 0.18
SMPD3-201ENST00000219334 BCL2P10415 239 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 MIC13Q5XKP0 118 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 ANGPTL6Q8NI99 470 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 RNASE6Q93091 150 aaKnown RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 G6PC2Q9NQR9 355 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 TRBV5-7A0A0A0MS05 114 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 C7orf77A4D0Y5 90 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF324O75467 553 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 GCM2O75603 506 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 NUTF2P61970 127 aaKnown RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 OR4X2Q8NGF9 303 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 WFDC6Q9BQY6 131 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 HLA-DQB1P01920 261 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 NPBWR2P48146 333 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 VWCEQ96DN2 955 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 NRIP2Q9BQI9 281 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 RSG1Q9BU20 258 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 TCF19Q9Y242 345 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 LOC389332A0A1B0GUA5 103 aa16.17■□□□□ 0.18
SMPD3-201ENST00000219334 PTBP3O95758 552 aaKnown RBP16.17■□□□□ 0.18
SMPD3-201ENST00000219334 ELOA3CA0A087WX78 387 aaPredicted RBP16.16■□□□□ 0.18
SMPD3-201ENST00000219334 A0A0B4J293 547 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF79Q15937 498 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 ISOC2Q96AB3 205 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 GALNT14Q96FL9 552 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 BET1LQ9NYM9 111 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 TDRD6O60522 2096 aaKnown RBP16.16■□□□□ 0.18
SMPD3-201ENST00000219334 CRYBA2P53672 197 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 CX3CL1P78423 397 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 SLC16A13Q7RTY0 426 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 STPG2Q8N412 459 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 OR51G1Q8NGK1 321 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 MOB4Q9Y3A3 225 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 IGKV3D-11A0A0A0MRZ8 115 aa16.16■□□□□ 0.18
SMPD3-201ENST00000219334 ZNF502Q8TBZ5 544 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 IMMP1LQ96LU5 166 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 RTTNQ86VV8 2226 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 A0A0G2JLM5 398 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 KLF4O43474 513 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 RPS20P60866 119 aaKnown RBP16.15■□□□□ 0.18
SMPD3-201ENST00000219334 C1QTNF12Q5T7M4 302 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 AQP3Q92482 292 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 CIDEAO60543 219 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 C8orf88P0DMB2 117 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 EGR4Q05215 589 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 TNFRSF9Q07011 255 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 WDR25Q64LD2 544 aaPredicted RBP16.15■□□□□ 0.18
SMPD3-201ENST00000219334 SELENOHQ8IZQ5 122 aaKnown RBP16.15■□□□□ 0.18
SMPD3-201ENST00000219334 SGMS2Q8NHU3 365 aa16.15■□□□□ 0.18
SMPD3-201ENST00000219334 TAF15Q92804 592 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMPD3-201ENST00000219334 RAB24Q969Q5 203 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 CACNA1EQ15878 2313 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 IGHV2OR16-5A0A0B4J2B6 119 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 C17orf51A8MQB3 221 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 AP4M1O00189 453 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 BTF3P20290 206 aaKnown RBP16.14■□□□□ 0.17
SMPD3-201ENST00000219334 ANOS1P23352 680 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 CKS2P33552 79 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 IGHV3-35A0A0C4DH35 117 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 NDUFB4O95168 129 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 ZNF146Q15072 292 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 IBA57Q5T440 356 aaKnown RBP16.14■□□□□ 0.17
SMPD3-201ENST00000219334 MRPL14Q6P1L8 145 aaKnown RBP16.14■□□□□ 0.17
SMPD3-201ENST00000219334 JMJD8Q96S16 334 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 HERPUD1Q15011 391 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 CDC42EP3Q9UKI2 254 aa16.14■□□□□ 0.17
SMPD3-201ENST00000219334 ZG16O60844 167 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 ACP7Q6ZNF0 438 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 ZIC3O60481 467 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 C9orf62Q8N4C0 152 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 SMDT1Q9H4I9 107 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 FOCADQ5VW36 1801 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms