RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 MPV17P39210 176 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 TAS2R60P59551 318 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 GCSAMLQ5JQS6 135 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 H1FOOQ8IZA3 346 aaPredicted RBP11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 DCTN5Q9BTE1 182 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 C7orf66A4D0T2 115 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 C5orf67F2Z3F1 127 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 SLC17A3O00476 420 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 AMY1AP04745 511 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 EGR4Q05215 589 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 GREM1O60565 184 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 MAS1LP35410 378 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 FAM214BQ7L5A3 538 aa11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNF764Q96H86 408 aaPredicted RBP11.65□□□□□ -0.54
TGFBR3-201ENST00000212355 TFF3Q07654 80 aa11.65□□□□□ -0.55
TGFBR3-201ENST00000212355 ZP4Q12836 540 aa11.65□□□□□ -0.55
TGFBR3-201ENST00000212355 RAB24Q969Q5 203 aa11.65□□□□□ -0.55
TGFBR3-201ENST00000212355 SVILO95425 2214 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 UBE2L6O14933 153 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 CBLN1P23435 193 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 STPG1Q5TH74 334 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 METTL26Q96S19 204 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 A6NDN8 102 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 SIGLEC12Q96PQ1 595 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 HS3ST3B1Q9Y662 390 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 COX6A1P12074 109 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF273Q14593 569 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 WNT5BQ9H1J7 359 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 ASPHD2Q6ICH7 369 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 LHFPL5Q8TAF8 219 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 SF3B6Q9Y3B4 125 aaKnown RBP11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 GATA2P23769 480 aaPredicted RBP11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 ZP1P60852 638 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
TGFBR3-201ENST00000212355 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 HERPUD1Q15011 391 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF837Q96EG3 531 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 CHD5Q8TDI0 1954 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 A0A1W2PQM1 296 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 A1L4Q6 167 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 MSGN1A6NI15 193 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 HOXD4P09016 255 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 PAFAH1B2P68402 229 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 VAX1Q5SQQ9 334 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 WDR54Q9H977 334 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 MESP1Q9BRJ9 268 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 FHL5Q5TD97 284 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 FCARP24071 287 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 KIR3DL3Q8N743 410 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 OR10J6PQ8NGY7 276 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 C1RLQ9NZP8 487 aa11.63□□□□□ -0.55
TGFBR3-201ENST00000212355 FOXI3A8MTJ6 420 aaPredicted RBP11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 CX3CL1P78423 397 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 FOXC2Q99958 501 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 IDI2-AS1Q9NZ38 188 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 CELA3BP08861 270 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 PNKDQ8N490 385 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 ANKRD36A6QL64 1941 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 MAP1BP46821 2468 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 DOCK3Q8IZD9 2030 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 LHX2P50458 406 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 DLX6P56179 175 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 TMEM187Q14656 261 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 ADIPOQQ15848 244 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 FAM53AQ6NSI3 398 aaPredicted RBP11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 SDHCQ99643 169 aaPredicted RBP11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 TRBV5-7A0A0A0MS05 114 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 CARFQ8N187 725 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 TMEM171Q8WVE6 324 aa11.62□□□□□ -0.55
TGFBR3-201ENST00000212355 PSMB11A5LHX3 300 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 C9JCJ5 164 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 DLL1O00548 723 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 PRSS2P07478 247 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 NPIPB3Q92617 1050 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ASXL3Q9C0F0 2248 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 RBFOX2O43251 390 aaKnown RBP eCLIP11.61□□□□□ -0.555e-7■■■■□ 21.2
TGFBR3-201ENST00000212355 FSTP19883 344 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms