RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 A0A1B0GU03 582 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 CLDN34H7C241 214 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 M0R1X1 148 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 DVL1O14640 695 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 SLC25A6P12236 298 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 LHFPL4Q7Z7J7 247 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 B4E171 279 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 H7BYZ3 331 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 TCAPO15273 167 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 MLNRO43193 412 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 TSPAN7P41732 249 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 LRRC29Q8WV35 223 aa12.65□□□□□ -0.38
EFNB1-201ENST00000204961 QTRT1Q9BXR0 403 aaKnown RBP12.65□□□□□ -0.38
EFNB1-201ENST00000204961 WDR61Q9GZS3 305 aaKnown RBP12.65□□□□□ -0.38
EFNB1-201ENST00000204961 LIN7CQ9NUP9 197 aaKnown RBP12.65□□□□□ -0.38
EFNB1-201ENST00000204961 ATP5G3P48201 142 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 PKIAP61925 76 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 MRPL49Q13405 166 aaKnown RBP12.64□□□□□ -0.39
EFNB1-201ENST00000204961 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
EFNB1-201ENST00000204961 Q6ZSR3 168 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 NCOR2Q9Y618 2525 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 OR5B21A6NL26 309 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 PRAMEF5Q5TYX0 476 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 OR13D1Q8NGV5 346 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 APELAP0DMC3 54 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 TCF23Q7RTU1 214 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 RPRMLQ8N4K4 120 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 NANOS1Q8WY41 292 aaKnown RBP12.64□□□□□ -0.39
EFNB1-201ENST00000204961 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
EFNB1-201ENST00000204961 PARLQ9H300 379 aa12.64□□□□□ -0.39
EFNB1-201ENST00000204961 GZMHP20718 246 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 GATA2P23769 480 aaPredicted RBP12.63□□□□□ -0.39
EFNB1-201ENST00000204961 KRTAP27-1Q3LI81 207 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 C1QL4Q86Z23 238 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 KLF13Q9Y2Y9 288 aaPredicted RBP12.63□□□□□ -0.39
EFNB1-201ENST00000204961 AQP7O14520 342 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 NDUFB4O95168 129 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 CD81P60033 236 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 BSXQ3C1V8 233 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 TECTBQ96PL2 329 aa12.63□□□□□ -0.39
EFNB1-201ENST00000204961 IGKV3D-15A0A087WSY6 115 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 GALR1P47211 349 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 PSMB3P49720 205 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 DEFB109BQ30KR1 87 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 TMEM45BQ96B21 275 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 YPEL4Q96NS1 127 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 GCH1P30793 250 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 TAS2R60P59551 318 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
EFNB1-201ENST00000204961 TMEM241Q24JQ0 296 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 ZNF497Q6ZNH5 498 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 DYSFO75923 2080 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 GRIFINA4D1Z8 144 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 RNPS1Q15287 305 aaKnown RBP12.62□□□□□ -0.39
EFNB1-201ENST00000204961 LRRC75BQ2VPJ9 315 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 TGIF2LYQ8IUE0 185 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 DEFB124Q8NES8 71 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 COQ2Q96H96 371 aa12.62□□□□□ -0.39
EFNB1-201ENST00000204961 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 M0R1B8 84 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 EREGO14944 169 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 GPR12P47775 334 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 MOB3BQ86TA1 216 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 RND1Q92730 232 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 SDF2L1Q9HCN8 221 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 VAX2Q9UIW0 290 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 OR9G9P0C7N8 305 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 C1QTNF9P0C862 333 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 ACP1P24666 158 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
EFNB1-201ENST00000204961 CHD8Q9HCK8 2581 aa12.61□□□□□ -0.39
EFNB1-201ENST00000204961 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 BATFQ16520 125 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 MOGAT3Q86VF5 341 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
EFNB1-201ENST00000204961 ZNF664Q8N3J9 261 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 IMMP2LQ96T52 175 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 CBLN4Q9NTU7 201 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 DCAF16Q9NXF7 216 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 C11orf94C9JXX5 98 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 PPP5D1E7EU14 171 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 RRHO14718 337 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 WT1P19544 449 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms