RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 OPN3Q9H1Y3 402 aaPredicted RBP6.93□□□□□ -1.3
CDC27-201ENST00000066544 A0A087WWC5 75 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 SLC25A6P12236 298 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 BSXQ3C1V8 233 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 SP5Q6BEB4 398 aaPredicted RBP6.93□□□□□ -1.3
CDC27-201ENST00000066544 WDR82Q6UXN9 313 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 C11orf53Q8IXP5 236 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 RHOVQ96L33 236 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 SIRT7Q9NRC8 400 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 M0R1X1 148 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 TMEM241Q24JQ0 296 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 UTF1Q5T230 341 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 ZNRF1Q8ND25 227 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 PINX1Q96BK5 328 aaKnown RBP6.93□□□□□ -1.3
CDC27-201ENST00000066544 QTRT1Q9BXR0 403 aaKnown RBP6.93□□□□□ -1.3
CDC27-201ENST00000066544 PARLQ9H300 379 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 WIPI2Q9Y4P8 454 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 CEP295Q9C0D2 2601 aa6.93□□□□□ -1.3
CDC27-201ENST00000066544 ANKRD11Q6UB99 2663 aaPredicted RBP6.93□□□□□ -1.3
CDC27-201ENST00000066544 RPL39P5Q59GN2 51 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 PRAMEF5Q5TYX0 476 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 ACP7Q6ZNF0 438 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 C1QL4Q86Z23 238 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 TMEM147Q9BVK8 224 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 HEYLQ9NQ87 328 aaPredicted RBP6.92□□□□□ -1.3
CDC27-201ENST00000066544 ZGRF1Q86YA3 2104 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 MED13LQ71F56 2210 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 OOEPA6NGQ2 149 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 IQCF6A8MYZ5 107 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 NPIPB11E5RHQ5 1161 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 ZNF83P51522 516 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 PCGF1Q9BSM1 259 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 HSPB7Q9UBY9 170 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 WASF3Q9UPY6 502 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 ZNF318Q5VUA4 2279 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 M0R296 226 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 OPN1MWP04001 364 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 ZNF883P0CG24 379 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 GPR12P47775 334 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 WT1P19544 449 aaPredicted RBP6.92□□□□□ -1.3
CDC27-201ENST00000066544 KIR2DL2P43627 348 aaPredicted RBP6.92□□□□□ -1.3
CDC27-201ENST00000066544 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
CDC27-201ENST00000066544 GAMTQ14353 236 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 R3HDM4Q96D70 268 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 KMT2EQ8IZD2 1858 aa6.92□□□□□ -1.3
CDC27-201ENST00000066544 OR9G9P0C7N8 305 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 PRSS8Q16651 343 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SPRNQ5BIV9 151 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 Q6ZT83 130 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SSMEM1Q8WWF3 244 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ZDHHC11Q9H8X9 412 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ADGRG4Q8IZF6 3080 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 COX5AP20674 150 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 RPL23P62829 140 aaKnown RBP6.91□□□□□ -1.3
CDC27-201ENST00000066544 HIST3H2BBQ8N257 126 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ABHD12Q8N2K0 398 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 OR13D1Q8NGV5 346 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 NPCDR1Q9BY65 106 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SEC14L6B5MCN3 397 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SPRY3O43610 288 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 MAS1LP35410 378 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 PNRC1Q12796 327 aaPredicted RBP6.91□□□□□ -1.3
CDC27-201ENST00000066544 ZNF718Q3SXZ3 478 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ZNF66Q6ZN08 573 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 WDR31Q8NA23 367 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 DEFB124Q8NES8 71 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 OR4X1Q8NH49 305 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 OR5B12Q96R08 314 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ACTR3CQ9C0K3 210 aaPredicted RBP6.91□□□□□ -1.3
CDC27-201ENST00000066544 CXXC4Q9H2H0 198 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 NAT8Q9UHE5 227 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 CXorf65A6NEN9 183 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SPINT2O43291 252 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 IGHV2-70P01814 119 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 ATP5G3P48201 142 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 TRIP6Q15654 476 aaKnown RBP6.91□□□□□ -1.3
CDC27-201ENST00000066544 INO80CQ6PI98 192 aaPredicted RBP6.91□□□□□ -1.3
CDC27-201ENST00000066544 PRDX2P32119 198 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 SMIM21Q3B7S5 101 aa6.91□□□□□ -1.3
CDC27-201ENST00000066544 PIGBOS1A0A0B4J2F0 54 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 A0A1W2PPV4 95 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 PROP1O75360 226 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 NDUFS6O75380 124 aaKnown RBP6.9□□□□□ -1.3
CDC27-201ENST00000066544 GZMHP20718 246 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 GALR1P47211 349 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 CDC34P49427 236 aaPredicted RBP6.9□□□□□ -1.3
CDC27-201ENST00000066544 MSMPQ1L6U9 139 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 DEFB109BQ30KR1 87 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
CDC27-201ENST00000066544 C11orf94C9JXX5 98 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms