RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF788Q6ZQV5 615 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 SSX9Q7RTT3 188 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 FAM216BQ8N7L0 139 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 ADTRPQ96IZ2 230 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 CCL13Q99616 98 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 RARRES2Q99969 163 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 IDI2-AS1Q9NZ38 188 aa6.84□□□□□ -1.31
VAMP3-201ENST00000054666 RAI1Q7Z5J4 1906 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-201ENST00000054666 hADV38S2A0JD32 116 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 DPRXA6NFQ7 191 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 TMPRSS2O15393 492 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 NDUFB7P17568 137 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 FGF7P21781 194 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 PAX6P26367 422 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 CEBPGP53567 150 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 UCNP55089 124 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 LINC00205P59089 165 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 CCL20P78556 96 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 KHDC3LQ587J8 217 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 SPINK9Q5DT21 86 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 DUX4L9Q6RFH8 374 aaPredicted RBP6.84□□□□□ -1.32
VAMP3-201ENST00000054666 C15orf54Q8N8G6 183 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF709Q8N972 641 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 QTRT1Q9BXR0 403 aaKnown RBP6.84□□□□□ -1.32
VAMP3-201ENST00000054666 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.32
VAMP3-201ENST00000054666 DYNLRB1Q9NP97 96 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 RPRMQ9NS64 109 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 GAB2Q9UQC2 676 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 MSRB2Q9Y3D2 182 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 SPTBN2O15020 2390 aa6.84□□□□□ -1.32
VAMP3-201ENST00000054666 DSCAMO60469 2012 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 BOD1L1Q8NFC6 3051 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 BSNQ9UPA5 3926 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 DYSFO75923 2080 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 SAA2-SAA4A0A096LPE2 208 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 C7orf77A4D0Y5 90 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 C17orf112F2Z3M2 114 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 SLC31A2O15432 143 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 MBP02144 154 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 THBDP07204 575 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 OR9G9P0C7N8 305 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 FAM87AP0C7U9 286 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-201ENST00000054666 SPCS3P61009 180 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 LCN15Q6UWW0 184 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 LYG1Q8N1E2 194 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 CLDND2Q8NHS1 167 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 RXFP4Q8TDU9 374 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 LEAP2Q969E1 77 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 RCC1LQ96I51 464 aaKnown RBP6.83□□□□□ -1.32
VAMP3-201ENST00000054666 VKORC1Q9BQB6 163 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 AIFM2Q9BRQ8 373 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 C20orf24Q9BUV8 137 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 GAL3ST2Q9H3Q3 398 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 GNG13Q9P2W3 67 aa6.83□□□□□ -1.32
VAMP3-201ENST00000054666 TRGV8A0A0C4DH27 118 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 LOC102723971A0A1B0GUV8 181 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 CGB3P0DN86 165 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 CGB7P0DN87 165 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 HOXA1P49639 335 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 GNG10P50151 68 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF134P52741 427 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 ICAM4Q14773 271 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 OR52E5Q8NH55 327 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 TMEM140Q9NV12 185 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 SLC25A10Q9UBX3 287 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 PUS1Q9Y606 427 aaKnown RBP eCLIP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 LINC00312Q9Y6C7 94 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 ICE1Q9Y2F5 2266 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 DSCAML1Q8TD84 2053 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 LAMA5O15230 3695 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 A0A1W2PPE3 182 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 PROP1O75360 226 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 IFNA10P01566 189 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 SRP19P09132 144 aaKnown RBP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 BCL2P10415 239 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 AKR1C3P42330 323 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 CT45A1Q5HYN5 189 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 TCF23Q7RTU1 214 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 CT45A3Q8NHU0 189 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 CORO2AQ92828 525 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 NIPSNAP3BQ9BS92 247 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 VSIRQ9H7M9 311 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 HEYLQ9NQ87 328 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-201ENST00000054666 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 MGAQ8IWI9 3026 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 HCFC1P51610 2035 aa6.82□□□□□ -1.32
VAMP3-201ENST00000054666 AKAP13Q12802 2813 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 PPIAL4EA0A075B759 164 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 PMS2P5A8MQ11 134 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 PPIAL4DF5H284 164 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms