RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CEP295Q9C0D2 2601 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
CTNS-201ENST00000046640 SLC31A2O15432 143 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 ZNF718Q3SXZ3 478 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 ZNF71Q9NQZ8 489 aaPredicted RBP10.98□□□□□ -0.65
CTNS-201ENST00000046640 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 EGR1P18146 543 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 COX5AP20674 150 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 DDTP30046 118 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 PRSS8Q16651 343 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 MOB1BQ7L9L4 216 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 BHLHA15Q7RTS1 189 aaPredicted RBP10.98□□□□□ -0.65
CTNS-201ENST00000046640 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 OR4X1Q8NH49 305 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 TMEM37Q8WXS4 190 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 NINJ1Q92982 152 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 IL22RA2Q969J5 263 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 WIPI2Q9Y4P8 454 aa10.98□□□□□ -0.65
CTNS-201ENST00000046640 KALRNO60229 2985 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 A0A087X0M5 115 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 A0A1B0GX30 115 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 A0A1W2PPQ1 181 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 C17orf98A8MV24 154 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 NCR3LG1Q68D85 454 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 IGFL2Q6UWQ7 119 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 RPP25LQ8N5L8 163 aaKnown RBP10.97□□□□□ -0.65
CTNS-201ENST00000046640 HIST1H2BLQ99880 126 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 PLSCR4Q9NRQ2 329 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 LIN7CQ9NUP9 197 aaKnown RBP10.97□□□□□ -0.65
CTNS-201ENST00000046640 PSG11Q9UQ72 335 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 TM4SF5O14894 197 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 S1PR2O95136 353 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 HBG1P69891 147 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 HBG2P69892 147 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 P2RY6Q15077 328 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 OR4F5Q8NH21 305 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 OR4F4Q96R69 305 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 VAX2Q9UIW0 290 aa10.97□□□□□ -0.65
CTNS-201ENST00000046640 TMEM210A6NLX4 147 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 J3QW42 95 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 IFNL4K9M1U5 179 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 SPRY3O43610 288 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 SOX15O60248 233 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 LRRC75BQ2VPJ9 315 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 ZNRF1Q8ND25 227 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 PCGF1Q9BSM1 259 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.65
CTNS-201ENST00000046640 HES4Q9HCC6 221 aa10.96□□□□□ -0.65
CTNS-201ENST00000046640 GZMHP20718 246 aa10.96□□□□□ -0.66
CTNS-201ENST00000046640 TAS2R60P59551 318 aa10.96□□□□□ -0.66
CTNS-201ENST00000046640 CD81P60033 236 aa10.96□□□□□ -0.66
CTNS-201ENST00000046640 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.66
CTNS-201ENST00000046640 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.66
CTNS-201ENST00000046640 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 PKIAP61925 76 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 SSX2Q16385 188 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 TMEM41BQ5BJD5 291 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 ACSM6Q6P461 480 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 ZNF66Q6ZN08 573 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 SH3BGRL2Q9UJC5 107 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 OOEPA6NGQ2 149 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 B4DEV8 164 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 KLK10O43240 276 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 EDDM3BP56851 147 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 UTF1Q5T230 341 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
CTNS-201ENST00000046640 DPPA3Q6W0C5 159 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 MRGPRGQ86SM5 289 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 ZNF645Q8N7E2 425 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 MISP3Q96FF7 219 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 PKDREJQ9NTG1 2253 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 ELOA3CA0A087WX78 387 aaPredicted RBP10.95□□□□□ -0.66
CTNS-201ENST00000046640 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 LINC00473A8K010 186 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 AHRRA9YTQ3 701 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 CGAP01215 116 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 CRYAAP02489 173 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 PRDX2P32119 198 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 GALR1P47211 349 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 UBE2G2P60604 165 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 TFF3Q07654 80 aa10.95□□□□□ -0.66
CTNS-201ENST00000046640 USF2Q15853 346 aaPredicted RBP10.95□□□□□ -0.66
CTNS-201ENST00000046640 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 TSTD3H0UI37 97 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 CHRNA7P36544 502 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 PNRC1Q12796 327 aaPredicted RBP10.94□□□□□ -0.66
CTNS-201ENST00000046640 SMIM21Q3B7S5 101 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 BSXQ3C1V8 233 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 MOGAT3Q86VF5 341 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 DEFB108BQ8NET1 73 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms