RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 A0A1W2PPZ6 126 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 SIGLEC5O15389 551 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 CXCL13O43927 109 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 EML2O95834 649 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 WNT1P04628 370 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 FOXF1Q12946 379 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 TNXAQ16473 311 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 ORMDL2Q53FV1 153 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 TMEFF1Q8IYR6 380 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 LRRC29Q8WV35 223 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 ST6GAL2Q96JF0 529 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 A1L4Q6 167 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 MARCH11A6NNE9 402 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 IGHMP01871 453 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 CD74P04233 296 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 OR52M1Q8NGK5 317 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM171Q8WVE6 324 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 LOC102723996A0A087X1L8 192 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 LAMTOR2Q9Y2Q5 125 aa5.29□□□□□ -1.56
VPS13D-201ENST00000011700 A0A1B0GUT8 65 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM202A6NGA9 273 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CACNG7P62955 275 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 RTP5Q14D33 572 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM86BQ8N661 226 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 FBLIM1Q8WUP2 373 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CCL26Q9Y258 94 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM50AO95807 157 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 OSR1Q8TAX0 266 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 DPRXA6NFQ7 191 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 C16orf97H3BN30 126 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 FFAR1O14842 300 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 IER3P46695 156 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 OR3A4PP47883 348 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 DDA1Q9BW61 102 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 SP9P0CG40 484 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 RD3LP0DJH9 198 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 PMVKQ15126 192 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.562e-6■■■■□ 20.7
VPS13D-201ENST00000011700 KCNS1Q96KK3 526 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CITED1Q99966 193 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 FSCN3Q9NQT6 498 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 NPDC1Q9NQX5 325 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 WTIPA6NIX2 430 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CYB561D1Q8N8Q1 229 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 SLC25A38Q96DW6 304 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 DNAJC30Q96LL9 226 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 SDHCQ99643 169 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 FCMRO60667 390 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF324O75467 553 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 C8orf88P0DMB2 117 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 SIGLEC14Q08ET2 396 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 RTN4RL2Q86UN3 420 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF502Q8TBZ5 544 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CHCHD1Q96BP2 118 aaKnown RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 OR2H1Q9GZK4 316 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 PTP4A3O75365 173 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CTLA4P16410 223 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 IRF3Q14653 427 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF774Q6NX45 483 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ELOVL5Q9NYP7 299 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 NPIPB9F8W1W9 429 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 NPIPB7O75200 414 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 NXPH3O95157 252 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 COX6B1P14854 86 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 SRSF7Q16629 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 PNKDQ8N490 385 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 CHAC1Q9BUX1 264 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 NTMQ9P121 344 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 PRR33A8MZF0 331 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 GAPTQ8N292 157 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 RNF182Q8N6D2 247 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 OR9G4Q8NGQ1 327 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 PHLDA1Q8WV24 401 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-201ENST00000011700 ASCL2Q99929 193 aa5.28□□□□□ -1.56
VPS13D-201ENST00000011700 DSCAML1Q8TD84 2053 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 OR4C46A6NHA9 309 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 H3BQ85 93 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 EMDP50402 254 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 SRSF2Q01130 221 aaKnown RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 ETFBKMTQ8IXQ9 262 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 FAM159AQ6UWV7 190 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MRGPRDQ8TDS7 321 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 FRRS1LQ9P0K9 344 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 JPT1Q9UK76 154 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 SPRY3O43610 288 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 CNTFRP26992 372 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 DUSP2Q05923 314 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 POC1AQ8NBT0 407 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 EEF1AKMT3Q96AZ1 226 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MRM2Q9UI43 246 aaKnown RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 TRGV8A0A0C4DH27 118 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 LIFP15018 202 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MRGPRFQ96AM1 343 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 KCNE3Q9Y6H6 103 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 A0A1W2PNR3 127 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 IQCF6A8MYZ5 107 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 FOXH1O75593 365 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms